| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1690 |
|---|
| Symbol | |
|---|
| ID | 3998087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1770920 |
|---|
| End bp | 1772953 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637959438 |
|---|
| Product | S-layer-related protein |
|---|
| Protein accession | YP_566334 |
|---|
| Protein GI | 91773642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01567] S-layer-related duplication domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.351956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCT TTATAGCAAT CGCAATAGCT GCTTTAATGG TACTGAGCTT TGTTTCAGTA
GCAAGTGCAG CAGACACAAT TGAGATTCGT AGTCCAGTAA TGGCAGGCAA TCTCGCTGGT
GAGAGAGATC TCTCCAATGT AACATTGAAT TCTACAACAT TTACAGATTT TGCAGCATTT
TTCTACGACA TTGATGACGG TATCGGTTCC GAAAAGATCG ATATTATCAC AGCTTCAACC
ACTGACAAAA TTCCAGAAGG AGATTTGATC TACACTTCAA ATCTTCAGAC TGTAAGTTTC
TCCTATGAAG GATGGGCAGA CTCCCCAGTT GATAACACAT TCGACAAGAT CGGTTTCCTC
GCAGAGGAAT ACGTTCCAAT CGACGAGGAC CCAAGTATCC TTTCCAAGCT TATTCTTGAT
GATGATGAGA AGTACACCAT GCGTGTCGGT CAGACACTCG ACCTTGGTGA CGGCTTTGCA
ATCACACCAA AACAGATCGA TGTTGACGGT AACAAGGTCT GGCTCGAGCT TACAAAGGAC
GGTAAGTTCC TTGACGATGA TGTGTTCAAC GCAGAGAACA GCCTGGACAA CAGCTCCTGG
GACTACGACA CCACTGTTGG TGGCGAAGAT GACATTGTTA TCATGAGAGT ACATGTTAAC
GAAGTATTCC AGGGTCAGGT CGACAGCCTC GCAATCATTG AGGGTATGTG GCTCATCTCC
GACGAAGCAA TGGAACTCGA AACTGACGAT GAGTTTGGCA AGTTCGAAAT AACAAGTCTT
ACCGCAGGCC CAGTAGGCAC CGGTCAGATC GTTATGAAGA CAACTGAAGA CATCACATTG
AGCAAGGACT CATCTATTGA GATCACTGAA GATATCATGA TCAAGACTGC AGACTCCAAT
GATCTTCGCT TCTACTTCGC AAAAGAGATC AGCGAGCCTG GTACCTATGA GATCAGAGGT
ACAGTCGCAA CACCTGATGC TAGTATAACT GGTATTTCAA CCGAATCCTG GACAGCAGCA
AGCTTTGCAG GTTTCTACTA TGACATCGAT GAGGACATCT CCTCAGAGAC TCTTACCGCA
ATCGTAGAGG GTGCAACTAA CAGAACAATC GCTGAAGGCA ACCTTACATA CGTTTCACAG
CTTCAGAGTG TAAGCTACAC CTATGAAGGA TGGGCAGACT CCCCAGTTGA TAATTCCTTC
GACAAGATCG GTTTCTTCGC AGAAGAATAC GTTCCAATCG ACCAGGATCC AAGCATCCTT
TCCAAGCTTA TTCTTGATGA TGATGAGAAG TACACCATGC GTGTCGGTCA GACACTCGAC
CTTGGTGACG GCTTTGCAAT CACACCAAAA CAGATCGATG TTGACGGTAA CAAGGTCTGG
CTCGAGCTTA CAAAGGACGG TAAGTTCCTT GACGATGATG TGTTCGATAC AACGGGCAAT
ATGGTCAACA GCTCCTGGGA CTACGGCACC ACTGTTGGTG GCGAAGATGA CATTGTTATC
ATGAGAGTAC ATGTTAACGA AGTATTCCAG GGTCAGGTCG ACAGCCTCGC AATCCTTGAG
GGTATGTGGC TTATCTCTGA CGAAGCAATG GAGATCGAGG ATGATGACGA GTTCGGTAAG
CTTGAAGTGA CAGGTATCAC AACAGGTCCA ACCGGTGCTA TCACCATGGA TTCAACCGAA
TCTATCACCC TTACTGCAGA CTCAACTAAG GAAATTGCAG AAGGAATGAG CTTCAAGGTT
GCAGACAGTG CAAACTCCGA AGTAAGGTTC TACCCATTCA TTGAGAAGAC AATCGCAGGC
GCAGTAGTCG ATGATGACGT AGTAGTCGAT GACGACGTAG TAGTCGATGA TGACGTAGTA
GTCGATGACG ACGTAGTAGT CGATGACGAC GAAGTAGTCG ATGACGACGT AGTAGTCGAT
GACGACGAAG TAGTCGATGA CGGCGATGAA GAAGATCCTG GAGTTCCAGG CTTTGAAGCA
GTCTTCGCAA TTGCAGGTCT CCTTGCAGTA GCATACTTCG TAAGAAGGAA CTAA
|
|---|
| Protein sequence | MKGFIAIAIA ALMVLSFVSV ASAADTIEIR SPVMAGNLAG ERDLSNVTLN STTFTDFAAF
FYDIDDGIGS EKIDIITAST TDKIPEGDLI YTSNLQTVSF SYEGWADSPV DNTFDKIGFL
AEEYVPIDED PSILSKLILD DDEKYTMRVG QTLDLGDGFA ITPKQIDVDG NKVWLELTKD
GKFLDDDVFN AENSLDNSSW DYDTTVGGED DIVIMRVHVN EVFQGQVDSL AIIEGMWLIS
DEAMELETDD EFGKFEITSL TAGPVGTGQI VMKTTEDITL SKDSSIEITE DIMIKTADSN
DLRFYFAKEI SEPGTYEIRG TVATPDASIT GISTESWTAA SFAGFYYDID EDISSETLTA
IVEGATNRTI AEGNLTYVSQ LQSVSYTYEG WADSPVDNSF DKIGFFAEEY VPIDQDPSIL
SKLILDDDEK YTMRVGQTLD LGDGFAITPK QIDVDGNKVW LELTKDGKFL DDDVFDTTGN
MVNSSWDYGT TVGGEDDIVI MRVHVNEVFQ GQVDSLAILE GMWLISDEAM EIEDDDEFGK
LEVTGITTGP TGAITMDSTE SITLTADSTK EIAEGMSFKV ADSANSEVRF YPFIEKTIAG
AVVDDDVVVD DDVVVDDDVV VDDDVVVDDD EVVDDDVVVD DDEVVDDGDE EDPGVPGFEA
VFAIAGLLAV AYFVRRN
|
|---|
| |