Gene Mbur_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1556 
Symbol 
ID3997792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1635650 
End bp1636348 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content42% 
IMG OID637959315 
ProductHAD family hydrolase 
Protein accessionYP_566212 
Protein GI91773520 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000353855 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAG CTCTGATATT CGATATGGAT GGTGTTCTGG TAGATTCTAT GCCTTATCAT 
ACCGAAGCTT TGAGCCACGT TTTTGCTGAA ATGGGTTTTT CCATGGATGC TCGGCATGTC
TATAATATGG AAGGCTCAAA GACAGTGGAG ATCGTAAGGT TCCTGCTGGA AAAAGATGGT
ATCGATCTTC TGGAAGTTGA TGTAGATGAA TTGATACACA GATATCGGGA TGAGTTTGCC
AGAATTGTAG AACTGAAGGC TTTTAGTGAG GTCCTCGAGT GTCTTCCTAT TTTAAAAGAG
CGTTTTATGC TTGCGGTGGT TTCCGGAGCT GACCGGAATA TAGTGCAAGA TATTATCACT
AATCTTTATG GTGGTATTTT TGATGTTGTC ATAAGTGGGG AGGATGTTGA TAATGGTAAG
CCTGCCCCTG ATCCTTTTCT GAGTGCTGCT GATATGTTCG GATTGGATGC AAATGAATGT
CTTGTTGTGG AAAATGCAGC AATGGGTGTT GAAGCTGCAA ATCGGGCAGG TATGTTCTGT
CTGGCTGTTC CGACCTATGT CAGTAAGGAA AGCCTGAAAA ATGCAGACCG TTTAGTGGAT
GACCATCGGA TGCTAAGGGA TTTCCTTCTT GAACTTGATC ATCTGGAAAA GGAAGCTGTT
GAGTTTTTAC GCCTGAAATT TAATTTAGCT CATAAATGA
 
Protein sequence
MLKALIFDMD GVLVDSMPYH TEALSHVFAE MGFSMDARHV YNMEGSKTVE IVRFLLEKDG 
IDLLEVDVDE LIHRYRDEFA RIVELKAFSE VLECLPILKE RFMLAVVSGA DRNIVQDIIT
NLYGGIFDVV ISGEDVDNGK PAPDPFLSAA DMFGLDANEC LVVENAAMGV EAANRAGMFC
LAVPTYVSKE SLKNADRLVD DHRMLRDFLL ELDHLEKEAV EFLRLKFNLA HK