| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1288 |
|---|
| Symbol | |
|---|
| ID | 3998576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1376596 |
|---|
| End bp | 1378083 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637959052 |
|---|
| Product | F420H2 dehydrogenase subunit M |
|---|
| Protein accession | YP_565957 |
|---|
| Protein GI | 91773265 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000089529 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACCAA TATTATCTTT GATCGTGCTG ATCCCGATTT TGTTCTCAGC CGTAACATTC
TTTACAAAAA CAAAGGAGCA GGCAAGGTTA TCCGCATTAG TGGGTACTCT TCTTACCCTG
GTCCTGACAA TGTACATGTA CTTCTCTTTT GATAGTACAT CTGCAGCAAT GCAGTTCGAA
GAAGCGGCTA ACTGGATCCC TTCACTTGGT ATCACATACC ATCTTGGTGT TGACGGTGTA
TCCATGCCAC TTATATTGCT CAATGCAATA GTCATTCCAC TGTTGATCAT CTACACTTGG
AATGATGTCA GAGCAGCACC TAACAGGTTC TATGCTCTGA TACTTGCAAT GCAGGGCGCA
GTCATCGGTG TTTTCATATC ACTGGACTTC TTCCTGTTCT ACGTATTCTG GGAGCTTACC
CTCGTACCAT TGTTCTTCAT GGTCAATATA TGGGGAGGAG CTAACAAGAA ACATGCAGCG
ATCAAGTTCT TCATCTACAC TCACGTAGCA TCTCTCGTGA TGCTTTTGGG TATATTTGGA
CTCTACTTTA ACGCATGGTC TCTTAGCGGA GTTCCAAACA TGGACATGAC TTATCTGATA
AGCCAGTTCC AGTTCCTGGA ATCCGAGATC GCTAGGGATT TAATATTCCT TGCACTATTG
TTCGGTTTCA TTGTGAAGAC ACCTGTAGTA CCATTCCATT CCTGGTTACC GGATGCATAT
TCTGAAGCAC CTACCGCAGG CAGTGTGCTC TTTATATTGC TCAAGATCGG TGGATATGGT
CTGTTCAGAG TAATGCTTCC AATGTTGCCA TTCACAGCAA CACCAAGCCT GATGATAACT
ATCATGGGAG CCCTTGGTGC AATAAGTATT ATTTACGGTG CATTCCTTGC ACTTGCGCAG
AAGGACCTTA AGAGAATGAT CGCATATTCC AGTATCAGCC ATATGGGATA CGTAACCCTT
GGTTGTGCAG GTCTTGTGAG CCTTTCAATA TCCGGTGCAA TGTTCCAGCA GTTCTCACAC
GGTTTGATCA TGAGCATTAT GTTCATGTCA TGTGGTGTGA TACAGACCAA AACTGGTACA
AGTATCATCA ATAATCTCGG TGGTCTTGCA CAGAGGATGC CTAAGCTCAC AGTGATCATG
GTACTTGGTT TCATGGCTTC ACTTGGATTG CCGGGATTGA CCGGTTTCAT CGCAGAGTTC
CTCGTGTTGA CATTCAGTTT CATTAACGTG CCTATTTACG TGATAATCGC TCTGCTGGCT
ATTGTAATTA CAGCAGCATA TCACCTGTGG GCATTGCAAA GGGCAATGTT TGGTCCTTTC
AATGAAAAGC TTGGTGACAT CGTGGATATT TCGTCCTTCC AGACGTTCTC CATGGGGATC
ATTGCCCTTC TCGTACTGTA CTTTGGATTG AACCCAAGTC CGGTGCTGGA TATGATGATA
ACAAATTCAG AACATATTGT CAGCCTGATG GCTGTAATGG GGGTCTAA
|
|---|
| Protein sequence | MLPILSLIVL IPILFSAVTF FTKTKEQARL SALVGTLLTL VLTMYMYFSF DSTSAAMQFE
EAANWIPSLG ITYHLGVDGV SMPLILLNAI VIPLLIIYTW NDVRAAPNRF YALILAMQGA
VIGVFISLDF FLFYVFWELT LVPLFFMVNI WGGANKKHAA IKFFIYTHVA SLVMLLGIFG
LYFNAWSLSG VPNMDMTYLI SQFQFLESEI ARDLIFLALL FGFIVKTPVV PFHSWLPDAY
SEAPTAGSVL FILLKIGGYG LFRVMLPMLP FTATPSLMIT IMGALGAISI IYGAFLALAQ
KDLKRMIAYS SISHMGYVTL GCAGLVSLSI SGAMFQQFSH GLIMSIMFMS CGVIQTKTGT
SIINNLGGLA QRMPKLTVIM VLGFMASLGL PGLTGFIAEF LVLTFSFINV PIYVIIALLA
IVITAAYHLW ALQRAMFGPF NEKLGDIVDI SSFQTFSMGI IALLVLYFGL NPSPVLDMMI
TNSEHIVSLM AVMGV
|
|---|
| |