Gene Mbur_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1166 
Symbol 
ID3998453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1254051 
End bp1255574 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content36% 
IMG OID637958932 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_565839 
Protein GI91773147 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCT CAAAAAAGGA AAATGAACTC GATGAGGCTG ATGAACTCCG AACAAAACTC 
AAGCTTGCTA ACAAAAAAAT AGAAGAGATA GAAGAGTTCA ATAAATTGCA CATTGAAAAT
CTCAATGATG TTATATTCAG CATCAATGAA CAAGGTAATT TCACATACAT TAGCCCTGCT
ATTGAAGATT TTACAGGGTA CAGAGCGGAA GAAGTAATGG GCACTTCTTT TATGCAGTAC
ATCCATCCAG ATGATCTTCC AGGATTGCTT CAGGATATTG ACCTTACCCT CGAAGGTGAA
CACAAACCGT ATATGTTCAG AGTAGTATCA AAAACAGGCA ACATAACCTA TGTACATACT
TCATCAAGAG GTATTCTAAA GAATGGAAAG GTTGTTGGGA TCAATGGAAT AATGGTTAAT
ATTGCTCAAC TTAAGGTGAT CGAATTCGAG CTCATGAAAC AAAAAGAAAA AGCTCAGCAT
TATCTGGATG TAGCAGGGGT TGCGATAATC GTCATTGACA ATGATCACAG AATATCACTT
GTAAATAAAA AAGCCTGTGG ACTTCTGGGA TATAAAGAAC ATGAGTTGCT CAATCGAAAC
TGGTTTGAAA TGGTAGTTCC AGAAGAAATA CGTGATTCTG TAGCTCAAAC ATTTACATTT
TCGTGTTCTG AAAATGCTTT ATCGACTCCA TTTGAATGTG CCATAAATAC AAAAGAAAAA
CAGAATAAGT TATGCTCCTG GAAATGCACG CAATTGAAGG ATGAGAATGG GAACACGAAT
GGCTACATAC TGGCCGGAGA AGACATTACG GAACGTAAAC AGGTGGAGGA AGCTCTATTA
AATGCTAAGC ATATGGCGGA AGATGCCAAT CGGACAAAGA GTGAGTTCAT AGCAAATATG
AGCCATGAGC TTAGAACGCC TCTTAATGCA ATTATAGGTT TTTCGGAAAT CCTTATTGAA
AAAAAGTTTG GAGATTTAAA TGATAAACAG GATAAATATC TGAACAATAT TTTTATAAGT
GGAAAAAAGC TTCTGGAAAT TATCAATTCA ATACTCGAGA TATCAAAGAT CGAATCAGGA
AATATTGAAA TAAACTATAA GACCATCAGC CTTGGAGACT TAATCGAGGA CTTAAAGGAA
GATATCAAAG AAAAACTTCC GGATCAAGCT GAAATGGTAT CTTTTGAGAT ATTAACGAAC
ATCGAAAATA TTATAGTTGA TATTAACAAG GTCGAAAAAT CAGTACTTCA CCTAATAGAG
AATGCTATTA AATTCTCAGA TAAAACCCAG CATGTGGAAG TAAGTCTTGA GTCTGTTGAT
GAAATGATAG CATTCAAGGT CACAGATAGA GGAATAGGGA TAACAGAAGA AGATATCAAG
AGGTTATTCA AGCCATTTAA TCAGCTGGAT GCCTCTTCCA CCCGCGTTTA CGGTGGGTTG
GGAATAGGAT TATACATTAT AAAAAAGATT GCAGAATTAC ATGGCGGTGG CCTTGCAATA
AAAAGTGAGT TAGAAAAAGG GTAA
 
Protein sequence
MEISKKENEL DEADELRTKL KLANKKIEEI EEFNKLHIEN LNDVIFSINE QGNFTYISPA 
IEDFTGYRAE EVMGTSFMQY IHPDDLPGLL QDIDLTLEGE HKPYMFRVVS KTGNITYVHT
SSRGILKNGK VVGINGIMVN IAQLKVIEFE LMKQKEKAQH YLDVAGVAII VIDNDHRISL
VNKKACGLLG YKEHELLNRN WFEMVVPEEI RDSVAQTFTF SCSENALSTP FECAINTKEK
QNKLCSWKCT QLKDENGNTN GYILAGEDIT ERKQVEEALL NAKHMAEDAN RTKSEFIANM
SHELRTPLNA IIGFSEILIE KKFGDLNDKQ DKYLNNIFIS GKKLLEIINS ILEISKIESG
NIEINYKTIS LGDLIEDLKE DIKEKLPDQA EMVSFEILTN IENIIVDINK VEKSVLHLIE
NAIKFSDKTQ HVEVSLESVD EMIAFKVTDR GIGITEEDIK RLFKPFNQLD ASSTRVYGGL
GIGLYIIKKI AELHGGGLAI KSELEKG