| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1088 |
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| Symbol | |
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| ID | 3998025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 1166020 |
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| End bp | 1167723 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637958860 |
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| Product | DNA ligase I, ATP-dependent (dnl1) |
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| Protein accession | YP_565768 |
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| Protein GI | 91773076 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACT TCAAGGAATT CGCTGATGTT TGTAAACAGA TAGAACATAT CTCAAGTTCA
CTGGAAATGA CAGATGTTGT CTCGGATATG TTAAAGTCGA TATCGACAGA GGAACTTCCT
GTTGTGACCC ATTTTGTGAT GGGGGACGTT TTTCCTGCAT GGAGTGTTGA ACAGCTTGGG
GTGGGTACGA GTCTTTTGTA TAGTGCCCTT TCGGAATCAT CCGGTCTTTC CCTGAAAGAG
ATTGAGGACC TTGTCCGTTC CACCGGTGAT ATAGGGGAGA CAGCGGTAGC AGCACTTGGT
AAGAAGAAAA AGAATAAGAA AAAGAATCAA GCATCGCTCT CATTTTTTTC GGAGGATGCA
GCTTCTGTCT CTATCTCCAT AATGGATGTC TTTGAAAGGT TCCTTGATAT TTCCAGATAT
TCAGGTGCAG GTTCGCAGAG TTCTAAGATG AGGAACCTTC AATTCCTTTT CAATTCTTCC
AGCTCCGAAG AAGCACGGTA TCTTGCCCGA CTGACTATCG AAGACCTTCG TATTGGTGTC
GGTGAAGGTA TCGTTCGTGA TGCTATTTCA AAAGCTTTCG ATGTTCCGGC AGGGGATATT
GAACGTGGTT TTATGTTAAC GAACGATCTG GGTCTTGTGG CAGTTGCTGC AAAAGAGGGT
GGTATTGAGG AGATATCAAA GCTCAGGATG GAGCTTGATC GTCCGATAAA GATGATGCTG
GCACAGGTTA CGCCTAGTAT TGAAGCTGCG ATCAAGGATC TTGGTATGCT GGCTGTCGAG
TGGAAATTCG ATGGGGCAAG GGTTCAAATT CATAAGAAAG GGGATTCGAT CAACATCTTT
TCGAGAAGGC TTGAGAATGT GACATTATCT CTGCCGGATA TCGTTGAGGC AGTGAAGCTT
CATGTGAAGG CGGATTCCGC AATTCTGGAA GGTGAGGCTG TAGCGGTCGA TGAAAATGGG
GCTCCTCGTG CTTTCCAGGA TATACTCAAA CGCTTCAGGA GAAAGTATGA TGTTGAAACA
ATGGTTCGTG AGATACCTTT GACATTGAAC CTTTTCGATA TTCTGTATCT GAATGGGGAT
GTACTGATGG ACCAGTCTCT TTTAAGAAGA AGGGAACAAC TGGTCGCATG TGTGGAGAAC
TGTGATAGCA TCAAGGTGGA TGAGCAGGTT CTCACAGATG ATGTGAATGT TGTGAACGAT
ATATATGCTG CTGCGCTTAA CGGTGGGCAC GAAGGGGTCA TGCTAAAGAA CCCGGAAGCT
TCGTATTCTC CCGGCAAGCG GGGTAAGAAC TGGCTCAAGA AGAAGCCTAT CATGGAGACG
CTCGACCTCG TTGTCATTGC TGCGGAATGG GGTTATGGAA AACGTGCAAA TCTTATCGGC
TCTTATGCTC TGGCATGTTT TGACCCGGAA GATGGAAAAT TCCTTCCGAT CGGCAAAGTA
GCTACAGGTT TTTCAGATGA GCAGCTTGCT GAACTTACTG AGGTCTTTTC CGAGCTTATT
ATTGGTGAAT CCGGTCGGGA GATCGAACTT AAACCTGATG TGGTGTTCGA GATCGCATTC
GAGGAGATCC AGAAAAGTAC GAACTATGGT TCAGGATATG CTCTCCGTTT CCCTCGACTT
GTAAATGTGA GGGAAGATAA ATCTCCGGAA GAGGCTGAAA CGATAGATCG TATCGAGAGC
ATCTATTTAT CACAGAGGGG CTAA
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| Protein sequence | MTDFKEFADV CKQIEHISSS LEMTDVVSDM LKSISTEELP VVTHFVMGDV FPAWSVEQLG
VGTSLLYSAL SESSGLSLKE IEDLVRSTGD IGETAVAALG KKKKNKKKNQ ASLSFFSEDA
ASVSISIMDV FERFLDISRY SGAGSQSSKM RNLQFLFNSS SSEEARYLAR LTIEDLRIGV
GEGIVRDAIS KAFDVPAGDI ERGFMLTNDL GLVAVAAKEG GIEEISKLRM ELDRPIKMML
AQVTPSIEAA IKDLGMLAVE WKFDGARVQI HKKGDSINIF SRRLENVTLS LPDIVEAVKL
HVKADSAILE GEAVAVDENG APRAFQDILK RFRRKYDVET MVREIPLTLN LFDILYLNGD
VLMDQSLLRR REQLVACVEN CDSIKVDEQV LTDDVNVVND IYAAALNGGH EGVMLKNPEA
SYSPGKRGKN WLKKKPIMET LDLVVIAAEW GYGKRANLIG SYALACFDPE DGKFLPIGKV
ATGFSDEQLA ELTEVFSELI IGESGREIEL KPDVVFEIAF EEIQKSTNYG SGYALRFPRL
VNVREDKSPE EAETIDRIES IYLSQRG
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