| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1038 |
|---|
| Symbol | |
|---|
| ID | 3998778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 1120382 |
|---|
| End bp | 1121176 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637958814 |
|---|
| Product | nitrogenase iron protein subunit NifH |
|---|
| Protein accession | YP_565723 |
|---|
| Protein GI | 91773031 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
|---|
| TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000199125 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAC AGAAAAGAAT AGCTATCTAT GGAAAAGGTG GCATCGGAAA ATCCAGTACT
GCATCCAACG TTGCAGCCGC ATGTGCCGAT GAGGGATACA CGGTAATGAT AATTGGCTGT
GACCCGAAAA GCGATTCATC CATCACCCTT CTTGGAGGAA AACGCATCCC GACCATCCTT
GATCTTCTGC GTAAGGAAAA GGATGTGAAA GAGGAAGATG TCGTATTTAC CGGTTACAAT
GGCGTGAAGT GTGTGGAAGT GGGCGGACCC GAGCCAGGTA TCGGCTGTGC CGGACGTGGG
ATCATCGTGG CCATCCAGAC ACTTAAGAAG ATATCAAAAA CGCTGAACGA AATGGACCTT
ATCATCTACG ATGTCCCTGG AGATATCGTA TGTGGTGGCT TTGTAGCACC TATACGCAAG
GGACTTGTAA AGGAAGCATA TGTCCTGACT TCCGGCGAAT ATATGCCCCT TTATGCAGCG
AACAATATCT GCCGAGGACT GGCAAAGATA AACACTCCCC TCAGCGGGAT CATATGTAAT
TCCCGCAGTG TGAGCCGTGA AAAAGAGATA GTGACCAAGT TCGCAAGTGA GATAGGAACC
GACCTTATGG CGTTCATACC AAAGGAACAG ATCGTGCAGG ATTGCGAAAG GGATGGTTTC
TCGGTCATGG AAAAAGCACC AGACTCCAGC ATTGCACAAG TTTATCGTGA CCTTGCGAAG
GCCATCATGC AACGCGATAC TTCCGTTATG CCTGTTGCTC TTGACGATGA ACGTCTCAGA
GAGCTTACCA GATAA
|
|---|
| Protein sequence | MSVQKRIAIY GKGGIGKSST ASNVAAACAD EGYTVMIIGC DPKSDSSITL LGGKRIPTIL
DLLRKEKDVK EEDVVFTGYN GVKCVEVGGP EPGIGCAGRG IIVAIQTLKK ISKTLNEMDL
IIYDVPGDIV CGGFVAPIRK GLVKEAYVLT SGEYMPLYAA NNICRGLAKI NTPLSGIICN
SRSVSREKEI VTKFASEIGT DLMAFIPKEQ IVQDCERDGF SVMEKAPDSS IAQVYRDLAK
AIMQRDTSVM PVALDDERLR ELTR
|
|---|
| |