Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0902 |
Symbol | ksgA |
ID | 3998646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 970456 |
End bp | 971268 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637958683 |
Product | dimethyladenosine transferase |
Protein accession | YP_565599 |
Protein GI | 91772907 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000593954 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGTACGAA AAATATTACA AAAATATGGC ATCCGTGGTG GATGTCATGA CCAACATTTT TTGATCGATG AACGATCACT TGATTCTATT GTCGACCAAG CAGAGCTTTC TGAAAAAGAT GTCGTACTGG AGATCGGAGG GGGCATAGGA AATCTTACTG AACGTCTTCT TGAAAAGGCG GGTAAGGTAT ACGTCATCGA ACTTGACCCT GCACTTGTAC ATGTCCTCAA AGACCGCTTT TCTGATAATG AGAAATTAGA GATAATTCCG GGCGATGTCC TGAAATTAGA TCTTCCTAAA TTCAATAAGG TTGTAGCAAA TCTTCCCTAT TCGATATCAT CTCCTATAAC CTTTAAGCTC TTTAAACACG AGTTTGAATT GGGAATACTA ATGTATCAGT ATGAATTTGC ACAGCGCATG GTGGCTAAAG CAAACACTGA AAACTACAGC AGGCTTTCAG TGAACACGCA TTATTTTGCT GATGCAGATA TTATCATGAA GATACCACCA TCTGCATTCT CACCGCCTCC GGAGGTCTGG TCTGCCGTGG TAAAAGTAGT TCCAAGACCA TCTTCTTTCC ACACCGAAGA CCCTCAGTTC TTCCTTGATC TGGTAACCGC AGTATTTCTC CAGCGTAGGA AAAAGCTAAG GAATGCCATT GTAAAAGGAA ATCATCTGTT AAACGTTCCG AATATCAAGC AGATAGTGGC TGAACTGCCT GAAGAGTTCA TGTCCAAGAG GGCTGAAAAT CTTGAACCGC ACGAACTGGC GGAGATCGCG AACTTTATCT TCAAAATGAG ATCTACTTCC TGA
|
Protein sequence | MVRKILQKYG IRGGCHDQHF LIDERSLDSI VDQAELSEKD VVLEIGGGIG NLTERLLEKA GKVYVIELDP ALVHVLKDRF SDNEKLEIIP GDVLKLDLPK FNKVVANLPY SISSPITFKL FKHEFELGIL MYQYEFAQRM VAKANTENYS RLSVNTHYFA DADIIMKIPP SAFSPPPEVW SAVVKVVPRP SSFHTEDPQF FLDLVTAVFL QRRKKLRNAI VKGNHLLNVP NIKQIVAELP EEFMSKRAEN LEPHELAEIA NFIFKMRSTS
|
| |