Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0857 |
Symbol | |
ID | 3996855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 900669 |
End bp | 901508 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637958642 |
Product | rhomboid-like protein |
Protein accession | YP_565558 |
Protein GI | 91772866 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00124204 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTCA CCTGTCGCTT TTGTGGAAAA TCGTATTGTT CAGATCACCG ACTTCCTGAA AGACATGCAT GCACAGGACT TGACAGGGAT ACCGGACAAT ACAATGATCA TTCTGATAAT AATTACCGCA GTGATCATAA CAGTTCGGGA CAAGTGCCCG GTACCAACAT GGATGAACTC GTGAAGAACA TGATGAAAGA AGCGGCAAAG ACCGCAGCAA AAGGGGCCGC ATCCCAAGCT GCCCGCAGGA CACGTTCATC AATAAAGACA AGCCCCTCGA TGGCGATCAT ATTCATTTGC ATCGTTTCGT TCTTCCTGAA AATTATTCCG GGCTATGTAG CATCATTCCA GCTACTGCCA AGCCTGATGT TCTTAAAACC ATGGACGCTT ATCACACACA TGTTCCTTCA TGCCAGTTTC GGACACCTGT TCTTTAATAT GCTGGTTTTG TTCTTCTTTG GCAGAGAACT TGAAAAACGT ATAGGAAAAG ACCTTTTCCT TTATGTATAT TTCATATCAG GAATAATTGC AGCACTCGGA TATTCAATAA CCAGTGCAAA CAATGTCCCG ATCATAGGGG CTAGCGGTGC GATCATGGGA GTATTTGCAG CACTTACAAT ACTTGCACCA AACATGGAAG TATATGTGTA TTTCATCCCG ATGAAAATAA AATACGCACT CTTATTGTTC GTACTTCTTG ACTTTATGCT ATTGAATGCA AATGATATGG TAGCCCACAC TGCCCACCTT AGTGGTGTCC TGGTAGGAGT AATCATGGGA TACAAGATCA AAAAGACAAT TGTACCGCGC AGTCAGAATT CCTACGGTTT TCGAAGGTGA
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Protein sequence | MMFTCRFCGK SYCSDHRLPE RHACTGLDRD TGQYNDHSDN NYRSDHNSSG QVPGTNMDEL VKNMMKEAAK TAAKGAASQA ARRTRSSIKT SPSMAIIFIC IVSFFLKIIP GYVASFQLLP SLMFLKPWTL ITHMFLHASF GHLFFNMLVL FFFGRELEKR IGKDLFLYVY FISGIIAALG YSITSANNVP IIGASGAIMG VFAALTILAP NMEVYVYFIP MKIKYALLLF VLLDFMLLNA NDMVAHTAHL SGVLVGVIMG YKIKKTIVPR SQNSYGFRR
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