Gene Mbur_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0788 
Symbol 
ID3996693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp823706 
End bp824455 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content41% 
IMG OID637958578 
Productnucleotidyl transferase 
Protein accessionYP_565494 
Protein GI91772802 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value7.72544e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAG ACCACAGTAA TAGTGGTAAT GGGGCCATAA CTACAGCATT ACTATTGGCA 
GCCGGAAAGG GCAGCCGTCT TTATCCTCTG ACACAAAACT CACCGAAATG CCTCACAATG
GTTCATGAGG CGTCTATTCT TGAACGACTT GTCATCAATT TGAAAAAGCA AGGGTTCAAA
CGTCTTGTTG TTGTCACTGG ATTCCAGGAA AAATGCATTC GTGACTTTTT AGAAACGCGG
GCTTGCGGCA TGGAAATTGA ATTTATTATA AGCCCCCTTT ATGCTACCAC CAATAACATC
TATTCACTCT GGATGGCACG TGATATTATT AATGAGCCGT TCTTACTTAT TGAAAGTGAT
CTTGTTTTTG ATGAATCCCT TCTGGATGAA ATGCGTTCTC CTGATAAAAT TGCCGTTGCA
CGCATGGAAC CGTGGCTGAA TGGTTCCACT GTCACGGTCA ATAGCTCCCA AAATGTTAAG
AAATTCCATA CCGGGATTGC AGAAGCTCTT GATGAGATCA GATACAAGAC TGTTAACATT
TACAGTTTTT CACTCTCTTC ATGGCATCGT ATTACAGAAA GACTAGATAA GTACATTTCT
GCTGGCAGAG TAAACGACTA TTATGAAACC GTATTTGCAG AAATGGTGGC TGATGATAGT
CTCGATCTTA AAACAGTCTC ATTTGACAGC AAAAGATGGT ATGAGATCGA TACAGTTGCA
GATCTGGCAA AGGCTGAGAC ACTATTTTAG
 
Protein sequence
MNSDHSNSGN GAITTALLLA AGKGSRLYPL TQNSPKCLTM VHEASILERL VINLKKQGFK 
RLVVVTGFQE KCIRDFLETR ACGMEIEFII SPLYATTNNI YSLWMARDII NEPFLLIESD
LVFDESLLDE MRSPDKIAVA RMEPWLNGST VTVNSSQNVK KFHTGIAEAL DEIRYKTVNI
YSFSLSSWHR ITERLDKYIS AGRVNDYYET VFAEMVADDS LDLKTVSFDS KRWYEIDTVA
DLAKAETLF