| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0762 |
|---|
| Symbol | |
|---|
| ID | 3996666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 797524 |
|---|
| End bp | 799410 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637958557 |
|---|
| Product | thiamine pyrophosphate enzyme-like TPP-binding |
|---|
| Protein accession | YP_565473 |
|---|
| Protein GI | 91772781 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA CCAGTAAACG TATATTAATG GGCAACGAAG CGATCGCTTT TGGAGCAATG
AAAGCCGGTG TTCAGATAAC AAGCGGTTAT CCGGGTACAC CTTCGACCGA GGTGATGGAG
ACCATCATCT CCCATGCAAA AAAATATGGC ATATATGCCG AATGGGCTAC CAACGAAAAA
GTGGCTCTTG AAACGGCGGT TGGAGCTGCT TATTCAGGTG CCAATACCAT GGTAACCATG
AAACAGGTGG GACTTAATGT AGCATCTGAC CCCCTCATGA GCCTTTCCTA CATAGGTATC
AAAGGGTCAC TTGTCATCCT TGTCTCCGAT GATCCCGGAC CCCATTCCTC CCAGACAGAA
CAGGATACGA GGTCCTTTGG ACACTTTGCA AATATTCCTG TCCTGGACCC GTCCACACCC
CAGGAAGCTT ATGATATGAC AAAGCTGGCC TTCAAGCTAT CACATGAGAT GGAGATACCT
GTGATACTCA GGACAACGAC ACGTTTATCC CATGGCTGTG CTGATGTGAT GATCGAAGAT
ATAGACCCGG TCTCCCGTAA CATCGAAGGT TTTGTAAAGG ATCCTCGCTG GATAATATTC
CCGGAACTGA CGGCTCAAAG ACACCCCTGG CTCGAAGAAC TTCAGATAAG GCTGTCAGAC
CGCTTTTCAG AATATTTCAC AGAGAGCTCA TTTAACTTAA TATCAAAAGG AAGCAGCAAG
ATCGGTATTG TAGCCTCTGG TGTTTCCTAT CTGTACGCAA AAGAAGCTAC GAAGGATAGC
TCTGCAACCT TCTCTCTTTT CAAGATTGGT ACAGTTTATC CTTTCCCTGA AAAAGCAGCC
CTTGATTTCC TGACCCATAT CAAAGACCTC ATCGTTATCG AAGAGCTTGA CCCATACCTT
GAGGAGCAGT TCCTGCAATT GATAGGCAAG CATCATCTCG ATACGAACGT ACATGGAAAG
AAGAACGGTC ATTTCTCAAT AAGTGGAGAA TATAATGTTG ATGTAGTGAT CGATGGGATC
AACAGCTCAC TTAAAACCAT CAATACAGAC ATTTCTGTCC TTCACCACTC ATCTCCTGTG
GTCGATAAAG AAAAGATACC TTCACTTCCC GTAAGACCAC CGACATTATG TGCAGGTTGC
ATGCACAGAA CAGTCTTTTA CGCATTCAAA AAAGTAGCTG GGAAATTAAA AACCGAAAAG
ATCAATACCA TATTTTCAGG AGACATCGGA TGTTACAGTC TTGGAAATGC CAAACCTCTC
AACATGGTGG ATACATGTCT TTGCATGGGA GCAGGGATAA GCATAGCAGC AGGGCTATCC
CATACACATC ATTATCAAGA AGACAAAAAA GCAAAACAGG TGGCATTTAT CGGTGACTCC
ACGTTTTTCC ATTCCGGGGT AGCTGCCGTT ATAAGTGCAG TGTACAACAA TGCTGACATC
ACCATTGCAG TCCTTGACAA TAGGACCACT GCTATGACAG GTCATCAACC TCATCCGGGC
ATTGGCCTGA CAGCCACAGG CGTTTCCACA AAGATCATCG ATATTGCCGA GGTCCTCAAA
AGCTGTGGAG TTGACCTTGT CGAGACCATA GATGTCAATG ACCTTGGTGA ATGCATAGAC
ACCGCAAAAA GAGCCATGGA TTTTGAAGGC CCTTCTGCTG TCGTATTCAA AGGAAAATGC
GTAGGCATCA CAAAAGGAGC CGGGCAATAT GTGATAGATG AGAATAAATG CACACGTTGC
AGGGTCTGTG TCACTCAACT TGGATGTCCT GCCATATTCT CGCCATCCAA CAAACCTCCG
GTCATACAAG ACAACTGCAC AGGTTGCAGT TTGTGTGCAC AGATCTGTCC ATCTGATGCT
ATTGTTCTGA AGGAGGATCT ACAATGA
|
|---|
| Protein sequence | MKLTSKRILM GNEAIAFGAM KAGVQITSGY PGTPSTEVME TIISHAKKYG IYAEWATNEK
VALETAVGAA YSGANTMVTM KQVGLNVASD PLMSLSYIGI KGSLVILVSD DPGPHSSQTE
QDTRSFGHFA NIPVLDPSTP QEAYDMTKLA FKLSHEMEIP VILRTTTRLS HGCADVMIED
IDPVSRNIEG FVKDPRWIIF PELTAQRHPW LEELQIRLSD RFSEYFTESS FNLISKGSSK
IGIVASGVSY LYAKEATKDS SATFSLFKIG TVYPFPEKAA LDFLTHIKDL IVIEELDPYL
EEQFLQLIGK HHLDTNVHGK KNGHFSISGE YNVDVVIDGI NSSLKTINTD ISVLHHSSPV
VDKEKIPSLP VRPPTLCAGC MHRTVFYAFK KVAGKLKTEK INTIFSGDIG CYSLGNAKPL
NMVDTCLCMG AGISIAAGLS HTHHYQEDKK AKQVAFIGDS TFFHSGVAAV ISAVYNNADI
TIAVLDNRTT AMTGHQPHPG IGLTATGVST KIIDIAEVLK SCGVDLVETI DVNDLGECID
TAKRAMDFEG PSAVVFKGKC VGITKGAGQY VIDENKCTRC RVCVTQLGCP AIFSPSNKPP
VIQDNCTGCS LCAQICPSDA IVLKEDLQ
|
|---|
| |