| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0629 |
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| Symbol | |
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| ID | 3996602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | - |
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| Start bp | 646027 |
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| End bp | 649176 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637958432 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_565350 |
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| Protein GI | 91772658 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGT CGGCATTTAG TCTGCTTCTA ATTTCTTTTA TAATATTGGC ATCGAGTTTT
CCTGCTCAAT GTATGGGATA TGATGCCAGG TCCTTCAATG AAGAAGGAGT AGCTCTGATG
CTGAATGGGA CTTATGATAA GGCTATTGAG AAATACGATC TAGCACTTGT TTCTGACCCA
AATTACCGAA TTGCTCTTGA AAATAAGGCA GCAGCTCAAT ATCTTTATGG CGATTATGAT
GAGGCGATTG CCACTTACGA TCATATTCTA AAGTTGCAAC CCGGATCCCC GTTGATCTTT
ACTAAAAAGG GTATGGTATT GGCAAAAAAA GGTGATTATG AGAATGCTAT CAAAACATAT
GATAAAGCCC TTATGTCCAT TTCAAAATAT ATTTTAGGCA ACACTCTGAA TGATACAAGT
GAATTGAATG GATCAACTTC TACAGCTTAC ATTATAGAAG AGCTTGGAGT TGACGAATCA
ATGATACTTT ATCATAAAGC CAAGTCACTT GAAGGACTTG GAAGGAATGA GGAAGCAATT
CAACTTTATG AAAAATTTCT TGAGATACAA CTTGAGCATT CAATGACTCT TTATGAAAAA
GGTCTTGATC ATGCAAGGGA CGGTAAGTCA GAAAGAGCCA TTGAACTATA TGATGAAGCA
CTACAGATAG ACCCTGATAA TAGAACTATT TGGTATTCAA AGGGGCAGGC ATTTGATAGT
CTTGGCCTCT ACGAAGAAGC TATCGAGTCC TACAACAAAG CGATAGAGTT CGATTCCACT
GATGTGAAAG TATGGTGGAA CAAAGCACTT GACTATGACA AGCTCGATAA AAAGGAAGAT
GCGATCATCT CTTATAGGGA AGTACTTGTT CTTGATCTTT ACAATGCAGA AGCATGGTTT
AACCTCGGGG TTGCGCTTGA AGGTACTGGT AATTATTTCG AGGCAATAAA CAGTTTTGAG
CAGGTTCTAT TGCTTGATCC CGATAATATT GATGCATGGC ACAAAAAGGG ACTTGTTCTC
AATAAAATCG GGCGGTTCGA TGAAGCACTG GTTAGTTATG ATAGTGCACT GAAGATAAAT
CCGGATAACA TTGCTAAAAT ATATACGTCC AATCCAGCAA TAGCAAGTTT GAACACCAGT
CAGTTTTCGG AGTGTTATGC GGCAATTCCT TCATTTAACA GTGATTCTGC AAAGATATGG
TATGACAAAG GTACTCTGTA TCTTGGATTA AGTGACTATG AAGAAGCGGT CCTTAGTTTT
GAAAAGGTTC TTGAACTGGA TTCAAAGCAC GCTGTTGTAT GGTATAAAAA AGCTCTTGCA
CTTGATAAAT TAGGAAATTA TAATGAAGCC ATTATATGCT ATACAGAAGC ATTGAGGAGA
GATCCATCTT GTCCAAATGT ATGGTATCTG AAAGGTTATG ACCTTGATAC TACTGGAAGA
TATAAAGAAG CTGTTTCATG TTACAGGAAA ACTGTAGAAC TTGATCCTCA GTTCACTCTT
GCATGGTATG CACTTGGTTT GGACCTTGCT CATATGGATG AGCACAGTGA AGCCATTGCT
GCATATGATC AGGTCATTGA ACAAAACTCT GATTTTTCAG ATGCTTATTA TAGAAAAGGA
AGGACCCTTG ATAAACTTGG TCTGTACCAA GATGCGATCG AAAGTTACAG AGTTGCTATA
TCATTGGATA GTTCCAACTC CGCTGCAAGT TTCCAGATGG AAGCAGATAT CAGCAGAGTA
GAACGATTAA ATCATTCATC TGCCATCCCC TCACAGAACA TAGGTCCGAT TTTTGATATT
TTCGAGATCA TTAAAGGTAT GACGGGTATT AGCGATTACA ATGCAGCTAT AATGGAACAG
AATAATGTCG ATCTTATCGG TGTTGTTCCA GATGGATATG ATGCGTGGGT TGCAAAAGGT
GGCTCATTGT TTGTAAAGGG GAGCTATGAG AATGCTCTGC TATCATATAA TAAAGCTATA
ATGATCAAAC CAAACTCCAG TGTTACCTGG TACATGAGAG GGCAAACATA TGAAATGCTT
GGGGATAGGT CTAGTGCAAT AAACAACTAT GAAAAGGCCG TTGATCTCGA TAGCAGCTAC
AAGGATGCAT GGTTCGCTCT TGCACAGAAC GTCTACAAGT CAAGTAATTA TTATTATGCG
ATCCAGGCGT ATGATGGCCT TTTGAATCTC GATCCGGAAA ACAAGACTGC ATTGCTCCAG
AAAGGTCAAG CTTATGATAA GATCGGTATT TATAGAAGCT CACTTGCTTC TTATAATAAA
CTTTTAAAGG TTGATACAGA TAATACAGAA GCATGGTATC TTAGGGGTTT GGCTTCTTAC
AATCTCGGAA ATTTAGAAGA TGCCGTATAT TCCTATGACA AGGTCCTTAG CTCAGATCCA
CAGAACATTG ATGTTTTACT TGCGCAGTCT CTTGTACTTG AAGATCTTGG ACTGTTTGAA
GATTCGATCA ACAACTACGA TAAAGTATTG GAGATGAAAG TAGATGATCC ATCGGTGCTT
ATGAAGAAAG GCAATGTTTA CGAAAAGCTT GGGCTTTACA AGGATGCGAA CGATTGTTAC
GATATTGTTC TGATAAATGA ACCAGCGAAC AGTCTTGCAT TGAGCAGGAA AGGTTTCAAT
CTGTACATGC TGGGTGATTA TATCGGTGCA ATGGACCAAT ACGACTTGGT CATTGCCAAA
AATCCATATG ATGCTGCAGC ATGGTATAAT AAGGGAAATG TGGCATATCT GACAAGTAGC
TATGCAGGTT CAACACAGTT CTACCTCAAA GCTGTTGAAT TGCAACCAAA AAGTATTACT
GCATGGTATA ATCTCGGATA TATTGCTAAT ATACGCGGAG ATGTGGACAC TGCGATCACA
TACTACGAAA AGGCTCTTGC GATCGATCCA AATGCAGCTT CTGCACTGTA TAACAAAAGG
TTTGCACACT ATAGGGTAGG ACAATCGGTT TCCGCAGAAA CTGAACGTAA GAAACTAGAT
GTGATCGATC CTGAATTTAT AGTAGCGCTT GATGACAGGG GAACAAAGTT CTTTACACCG
GATGAATATG ATCCAGCAAT TGTTTATGAG CTACCAAGCA GATGGTATGA TGGTGAAGAC
ATGCCGGGAA CAACTTCAGT AAAGGAATGA
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| Protein sequence | MSKSAFSLLL ISFIILASSF PAQCMGYDAR SFNEEGVALM LNGTYDKAIE KYDLALVSDP
NYRIALENKA AAQYLYGDYD EAIATYDHIL KLQPGSPLIF TKKGMVLAKK GDYENAIKTY
DKALMSISKY ILGNTLNDTS ELNGSTSTAY IIEELGVDES MILYHKAKSL EGLGRNEEAI
QLYEKFLEIQ LEHSMTLYEK GLDHARDGKS ERAIELYDEA LQIDPDNRTI WYSKGQAFDS
LGLYEEAIES YNKAIEFDST DVKVWWNKAL DYDKLDKKED AIISYREVLV LDLYNAEAWF
NLGVALEGTG NYFEAINSFE QVLLLDPDNI DAWHKKGLVL NKIGRFDEAL VSYDSALKIN
PDNIAKIYTS NPAIASLNTS QFSECYAAIP SFNSDSAKIW YDKGTLYLGL SDYEEAVLSF
EKVLELDSKH AVVWYKKALA LDKLGNYNEA IICYTEALRR DPSCPNVWYL KGYDLDTTGR
YKEAVSCYRK TVELDPQFTL AWYALGLDLA HMDEHSEAIA AYDQVIEQNS DFSDAYYRKG
RTLDKLGLYQ DAIESYRVAI SLDSSNSAAS FQMEADISRV ERLNHSSAIP SQNIGPIFDI
FEIIKGMTGI SDYNAAIMEQ NNVDLIGVVP DGYDAWVAKG GSLFVKGSYE NALLSYNKAI
MIKPNSSVTW YMRGQTYEML GDRSSAINNY EKAVDLDSSY KDAWFALAQN VYKSSNYYYA
IQAYDGLLNL DPENKTALLQ KGQAYDKIGI YRSSLASYNK LLKVDTDNTE AWYLRGLASY
NLGNLEDAVY SYDKVLSSDP QNIDVLLAQS LVLEDLGLFE DSINNYDKVL EMKVDDPSVL
MKKGNVYEKL GLYKDANDCY DIVLINEPAN SLALSRKGFN LYMLGDYIGA MDQYDLVIAK
NPYDAAAWYN KGNVAYLTSS YAGSTQFYLK AVELQPKSIT AWYNLGYIAN IRGDVDTAIT
YYEKALAIDP NAASALYNKR FAHYRVGQSV SAETERKKLD VIDPEFIVAL DDRGTKFFTP
DEYDPAIVYE LPSRWYDGED MPGTTSVKE
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