Gene Mbur_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0593 
Symbol 
ID3996805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp602025 
End bp604790 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content42% 
IMG OID637958396 
ProductCRISPR-associated helicase Cas3 
Protein accessionYP_565314 
Protein GI91772622 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR01587] CRISPR-associated helicase Cas3 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.834864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGAA ACTGGGGAAA GTCAAAAAGT GCAACTGAAT ATGATAATTC TAATTATCAC 
TTATTAGTTT ATCATGGTCT GGATGTTGCA GCCACGGGCA GGACAATTCT GCAAAAAGAT
AAATTATTAT TGCAAAAATT CACAGACATA ATTTCTCTTG ATGAGGAAAA GACCATTTCG
TTGATCTCGT TTTGTCTTGC AGTTCATGAC ATCGGCAAAT TCTCAGAGCG TTTTCAAAAC
CTTCAGCCAG AGCTGTTGAA CGATCTAAGA GATCATGACA GTGACAAGAG CTACACAGTA
CGCCATGATA GCATGGGACT ACATCTTTGG AAAGAGATCT GGTCAACTGC ATTTGATGAA
AATTGGCTTG GCCTGGATAA GGAGATCTAT GATAAATTCG ATTGGAATGA CCTTATCGGC
CCCTGGATGA ATTCAGTGAC CGGACATCAT GGCAAACCTC CGGAATATGT GCACAATGGA
ATCACTATAA GTTCAAGTGA TCTTTTCACA GACGAAGATA TTGAAATGGC AAGTTCCTTT
GTAAAAGAAG CAGCTTCGTT ACTACTAAGT GATGCATTAA GTGATGCATT CGAGTTCACT
TCATGTTCTG AAGAACAGGC ATATGATATT GACGATATGA TCCTGGCTTT TAAAAGAACG
TCATGGCTTA TCGCGGGTCT TGCCATCGTC AGTGATTGGA TAGGTTCCTC TGAAGAGCAT
TTTGAATATA TCTCTTCCGA AATACCACTT AAAGAATATT TGGATAAATA TGCTTTACCA
AATGCTGAAA AGGCATTGGA AGATGCGGGT ATCTATCCAT CTACACCTTC TACAATAACT
GGCATGGATG AATTGTTCCC GGACATCGTT GTTCCCAGTC CCATGCAAGA GCATGTTTCG
AACTGTGATG TTGCAGCTGG TCCACAATTG TTTATTTTGG AAGATGCTAC CGGTAGTGGA
AAAACAGAAG CTGCGTTATG TTTAGCACAT CGGTTGATGG CTAAAGGACT TGCACAGGGA
GCTTTTGTGG GGTTACCCAC CATGGCTACA TCCAATGCAA TGTATGAAAG GCTGGGTAAT
TCATATCAAA GGATGTATGC CAAAGGCGAA AGACCATCTT TGGTACTTGC ACATGGTCAA
AATTATCTGT CTGATGCATT TAGAAGCTCG ATTGGCTTTC AAAATTCAAA AAATGGTTAT
TACGGAGATG GATCTTCAGG TGATGAGACT ATTCAGGCAC AATGCTCTGC ATGGATCGCT
GACAATAGGA AGAAAGCATT GCTTGCAGAT GTGGGTGTTG GGACTATTGA CCAGGCATTG
ATGGCGATCC TTCAATCCAA TCATCAATCG TTAAGGCTGT TAGGTCTCTC ACGTAATGTG
CTCATAGTCG ACGAAGTTCA TGCTTATGAC CCATATATGC ATACGTTACT TTGTAGCCTT
CTTGAATTTC ATGTATCCCT TGGTGGCAGT GCTATCCTTC TTTCTGCTAC ATTGCCACAG
AAACATCGTC AAGGACTAAT ATCTCATTTT TGTAAGGGGC TGGATAGTCC GACTATGAGT
GCATCCAATG AAGAATATGC ACTTGTAACT CATGTTTCTG AAAACGAGAT ATCTGAAACT
CCCATAGGAA CACGTCCCGG CACTGAACGC ACTGTCAATG TGGAATTCCT GCACGATGAA
CCATCTGTTG AAGACAAGTT GATCAAATGT TCAAAGGAAG GGAAATGCTG CTGCTGGATA
CGCAATACCG TCGATGATGC CATCGAAGCC TACGAAAAGA TCGTATCCGA ATTGGGCAAT
GACAATGTAC TTCTGTTCCA TGCAAGATTT GCCATGGGAG ACCGTTTAAA GATCGAAAAT
GACGTTCTCG AAACTTTTGG GAAAAGAAGT GACAGAAACT GCCGTAAGGG AAAGGTACTG
ATCGCCACAC AGGTCGTGGA ACAATCATTG GACATTGACT TTGATTATAT GGTCAGCGAT
CTTGCGCCTA TGGACCTGCT ATTCCAAAGA GCAGGAAGAT TACAGCGTCA TCCACGCGAT
AAGAAGGGTT CTATAAGTGA AAATGATGAA AGAGGGAGGC CACTTCTTGG GATATTGGCT
CCTGAATTAT CAAAGGATGT TACTGAGAAC TGGTATTCAG ACATGTTCAA AGGTGGAGCG
TATGTGTATC CTTCCCATGG GAAGTTGTGG CTTACTGCTA ATTTGCTTTT TGAACATGGC
CGTTTCAGTA TTCCAAAGGA CAGCCGATCT TTTATTGAAT ATGTTTTTGG CGAAAATGCA
AATGAAACTG TGCCGGCTCC ACTAAGAGCA CGTGATGAAA AGGCACAGGG TGAAGCAATG
GCTGACAGAT CGATGGCTAA CTGGCGATCA TTGAATCTAT TGCAGGGTTA TGAACGCTCT
GGTTCACAAT GGGTTGATGA TACCATAACC CCGACCCGCC TTGGTGAATC TGTGAATGTA
CGCCTTGCAC AGTTCGAAGG TCAGAAACTT GTTCCTTTGC GAGGTCCTGA TGATCTTTCA
TGGGAACTTA GTCAATTAAG CATAAGCGGA GGGCGTGTTA AATTTGTGGA TGATCATGGC
GAAGAGTTGA ATAAATGCAT AGAAGAGGCA CAGGTCTCAA TGAGAGATAA GGGTAAATGG
AGTGTATTGA TCCCTATGGG GTCTGATGAT GGCGTTAATT GGACAGGTAA TGCGAAGAAC
AAACACAACG ATCGTGTCGA TCTTGCATAT GATGCACGGA TCGGACTTAG GATGTGCAAT
AAATAA
 
Protein sequence
MYRNWGKSKS ATEYDNSNYH LLVYHGLDVA ATGRTILQKD KLLLQKFTDI ISLDEEKTIS 
LISFCLAVHD IGKFSERFQN LQPELLNDLR DHDSDKSYTV RHDSMGLHLW KEIWSTAFDE
NWLGLDKEIY DKFDWNDLIG PWMNSVTGHH GKPPEYVHNG ITISSSDLFT DEDIEMASSF
VKEAASLLLS DALSDAFEFT SCSEEQAYDI DDMILAFKRT SWLIAGLAIV SDWIGSSEEH
FEYISSEIPL KEYLDKYALP NAEKALEDAG IYPSTPSTIT GMDELFPDIV VPSPMQEHVS
NCDVAAGPQL FILEDATGSG KTEAALCLAH RLMAKGLAQG AFVGLPTMAT SNAMYERLGN
SYQRMYAKGE RPSLVLAHGQ NYLSDAFRSS IGFQNSKNGY YGDGSSGDET IQAQCSAWIA
DNRKKALLAD VGVGTIDQAL MAILQSNHQS LRLLGLSRNV LIVDEVHAYD PYMHTLLCSL
LEFHVSLGGS AILLSATLPQ KHRQGLISHF CKGLDSPTMS ASNEEYALVT HVSENEISET
PIGTRPGTER TVNVEFLHDE PSVEDKLIKC SKEGKCCCWI RNTVDDAIEA YEKIVSELGN
DNVLLFHARF AMGDRLKIEN DVLETFGKRS DRNCRKGKVL IATQVVEQSL DIDFDYMVSD
LAPMDLLFQR AGRLQRHPRD KKGSISENDE RGRPLLGILA PELSKDVTEN WYSDMFKGGA
YVYPSHGKLW LTANLLFEHG RFSIPKDSRS FIEYVFGENA NETVPAPLRA RDEKAQGEAM
ADRSMANWRS LNLLQGYERS GSQWVDDTIT PTRLGESVNV RLAQFEGQKL VPLRGPDDLS
WELSQLSISG GRVKFVDDHG EELNKCIEEA QVSMRDKGKW SVLIPMGSDD GVNWTGNAKN
KHNDRVDLAY DARIGLRMCN K