Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0593 |
Symbol | |
ID | 3996805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 602025 |
End bp | 604790 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637958396 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_565314 |
Protein GI | 91772622 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.834864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGAA ACTGGGGAAA GTCAAAAAGT GCAACTGAAT ATGATAATTC TAATTATCAC TTATTAGTTT ATCATGGTCT GGATGTTGCA GCCACGGGCA GGACAATTCT GCAAAAAGAT AAATTATTAT TGCAAAAATT CACAGACATA ATTTCTCTTG ATGAGGAAAA GACCATTTCG TTGATCTCGT TTTGTCTTGC AGTTCATGAC ATCGGCAAAT TCTCAGAGCG TTTTCAAAAC CTTCAGCCAG AGCTGTTGAA CGATCTAAGA GATCATGACA GTGACAAGAG CTACACAGTA CGCCATGATA GCATGGGACT ACATCTTTGG AAAGAGATCT GGTCAACTGC ATTTGATGAA AATTGGCTTG GCCTGGATAA GGAGATCTAT GATAAATTCG ATTGGAATGA CCTTATCGGC CCCTGGATGA ATTCAGTGAC CGGACATCAT GGCAAACCTC CGGAATATGT GCACAATGGA ATCACTATAA GTTCAAGTGA TCTTTTCACA GACGAAGATA TTGAAATGGC AAGTTCCTTT GTAAAAGAAG CAGCTTCGTT ACTACTAAGT GATGCATTAA GTGATGCATT CGAGTTCACT TCATGTTCTG AAGAACAGGC ATATGATATT GACGATATGA TCCTGGCTTT TAAAAGAACG TCATGGCTTA TCGCGGGTCT TGCCATCGTC AGTGATTGGA TAGGTTCCTC TGAAGAGCAT TTTGAATATA TCTCTTCCGA AATACCACTT AAAGAATATT TGGATAAATA TGCTTTACCA AATGCTGAAA AGGCATTGGA AGATGCGGGT ATCTATCCAT CTACACCTTC TACAATAACT GGCATGGATG AATTGTTCCC GGACATCGTT GTTCCCAGTC CCATGCAAGA GCATGTTTCG AACTGTGATG TTGCAGCTGG TCCACAATTG TTTATTTTGG AAGATGCTAC CGGTAGTGGA AAAACAGAAG CTGCGTTATG TTTAGCACAT CGGTTGATGG CTAAAGGACT TGCACAGGGA GCTTTTGTGG GGTTACCCAC CATGGCTACA TCCAATGCAA TGTATGAAAG GCTGGGTAAT TCATATCAAA GGATGTATGC CAAAGGCGAA AGACCATCTT TGGTACTTGC ACATGGTCAA AATTATCTGT CTGATGCATT TAGAAGCTCG ATTGGCTTTC AAAATTCAAA AAATGGTTAT TACGGAGATG GATCTTCAGG TGATGAGACT ATTCAGGCAC AATGCTCTGC ATGGATCGCT GACAATAGGA AGAAAGCATT GCTTGCAGAT GTGGGTGTTG GGACTATTGA CCAGGCATTG ATGGCGATCC TTCAATCCAA TCATCAATCG TTAAGGCTGT TAGGTCTCTC ACGTAATGTG CTCATAGTCG ACGAAGTTCA TGCTTATGAC CCATATATGC ATACGTTACT TTGTAGCCTT CTTGAATTTC ATGTATCCCT TGGTGGCAGT GCTATCCTTC TTTCTGCTAC ATTGCCACAG AAACATCGTC AAGGACTAAT ATCTCATTTT TGTAAGGGGC TGGATAGTCC GACTATGAGT GCATCCAATG AAGAATATGC ACTTGTAACT CATGTTTCTG AAAACGAGAT ATCTGAAACT CCCATAGGAA CACGTCCCGG CACTGAACGC ACTGTCAATG TGGAATTCCT GCACGATGAA CCATCTGTTG AAGACAAGTT GATCAAATGT TCAAAGGAAG GGAAATGCTG CTGCTGGATA CGCAATACCG TCGATGATGC CATCGAAGCC TACGAAAAGA TCGTATCCGA ATTGGGCAAT GACAATGTAC TTCTGTTCCA TGCAAGATTT GCCATGGGAG ACCGTTTAAA GATCGAAAAT GACGTTCTCG AAACTTTTGG GAAAAGAAGT GACAGAAACT GCCGTAAGGG AAAGGTACTG ATCGCCACAC AGGTCGTGGA ACAATCATTG GACATTGACT TTGATTATAT GGTCAGCGAT CTTGCGCCTA TGGACCTGCT ATTCCAAAGA GCAGGAAGAT TACAGCGTCA TCCACGCGAT AAGAAGGGTT CTATAAGTGA AAATGATGAA AGAGGGAGGC CACTTCTTGG GATATTGGCT CCTGAATTAT CAAAGGATGT TACTGAGAAC TGGTATTCAG ACATGTTCAA AGGTGGAGCG TATGTGTATC CTTCCCATGG GAAGTTGTGG CTTACTGCTA ATTTGCTTTT TGAACATGGC CGTTTCAGTA TTCCAAAGGA CAGCCGATCT TTTATTGAAT ATGTTTTTGG CGAAAATGCA AATGAAACTG TGCCGGCTCC ACTAAGAGCA CGTGATGAAA AGGCACAGGG TGAAGCAATG GCTGACAGAT CGATGGCTAA CTGGCGATCA TTGAATCTAT TGCAGGGTTA TGAACGCTCT GGTTCACAAT GGGTTGATGA TACCATAACC CCGACCCGCC TTGGTGAATC TGTGAATGTA CGCCTTGCAC AGTTCGAAGG TCAGAAACTT GTTCCTTTGC GAGGTCCTGA TGATCTTTCA TGGGAACTTA GTCAATTAAG CATAAGCGGA GGGCGTGTTA AATTTGTGGA TGATCATGGC GAAGAGTTGA ATAAATGCAT AGAAGAGGCA CAGGTCTCAA TGAGAGATAA GGGTAAATGG AGTGTATTGA TCCCTATGGG GTCTGATGAT GGCGTTAATT GGACAGGTAA TGCGAAGAAC AAACACAACG ATCGTGTCGA TCTTGCATAT GATGCACGGA TCGGACTTAG GATGTGCAAT AAATAA
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Protein sequence | MYRNWGKSKS ATEYDNSNYH LLVYHGLDVA ATGRTILQKD KLLLQKFTDI ISLDEEKTIS LISFCLAVHD IGKFSERFQN LQPELLNDLR DHDSDKSYTV RHDSMGLHLW KEIWSTAFDE NWLGLDKEIY DKFDWNDLIG PWMNSVTGHH GKPPEYVHNG ITISSSDLFT DEDIEMASSF VKEAASLLLS DALSDAFEFT SCSEEQAYDI DDMILAFKRT SWLIAGLAIV SDWIGSSEEH FEYISSEIPL KEYLDKYALP NAEKALEDAG IYPSTPSTIT GMDELFPDIV VPSPMQEHVS NCDVAAGPQL FILEDATGSG KTEAALCLAH RLMAKGLAQG AFVGLPTMAT SNAMYERLGN SYQRMYAKGE RPSLVLAHGQ NYLSDAFRSS IGFQNSKNGY YGDGSSGDET IQAQCSAWIA DNRKKALLAD VGVGTIDQAL MAILQSNHQS LRLLGLSRNV LIVDEVHAYD PYMHTLLCSL LEFHVSLGGS AILLSATLPQ KHRQGLISHF CKGLDSPTMS ASNEEYALVT HVSENEISET PIGTRPGTER TVNVEFLHDE PSVEDKLIKC SKEGKCCCWI RNTVDDAIEA YEKIVSELGN DNVLLFHARF AMGDRLKIEN DVLETFGKRS DRNCRKGKVL IATQVVEQSL DIDFDYMVSD LAPMDLLFQR AGRLQRHPRD KKGSISENDE RGRPLLGILA PELSKDVTEN WYSDMFKGGA YVYPSHGKLW LTANLLFEHG RFSIPKDSRS FIEYVFGENA NETVPAPLRA RDEKAQGEAM ADRSMANWRS LNLLQGYERS GSQWVDDTIT PTRLGESVNV RLAQFEGQKL VPLRGPDDLS WELSQLSISG GRVKFVDDHG EELNKCIEEA QVSMRDKGKW SVLIPMGSDD GVNWTGNAKN KHNDRVDLAY DARIGLRMCN K
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