Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0197 |
Symbol | |
ID | 3997164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 179653 |
End bp | 180345 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637958034 |
Product | putative RNA-associated protein |
Protein accession | YP_564957 |
Protein GI | 91772265 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1500] Predicted exosome subunit |
TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000236585 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCTC TTGATGAATC ATTGGTTGCA AGGCTAAAGA AAGGCAGCAA ACATTATGAA GTGCTTGTGG ATCCTGATGG GGCTCTGGAA TTCAAGAAAG GAGGCAATGT TAAAATTGAG GATATTCTTG CAGTGGAGTC CATCTTCGAG GATTCGGGCA GGGGAGACCA TGCGGCAGAA TCCGATCTTA CCAATGCATT CCAGACCGAT GATGTTTTTG AAATTGCAGC GTATATTATC AAACACGGCG AAATTCAGCT TACTAAGGAA CAGAGGAAAC ATATTCTTGA GGAAAAGACC AGACAGGTCA TTTCCACCAT TGCACGAAAT GCGATAAATC CTCAAACGAG GGCACCTCAC CCTCCTGGAA GGATCGAGAA GGCAATGGAA GAGGCAAAGG TCCATATCGA TCCTCTGAAG GGTGTGGATG AACAGGTCAA TATTGTCATG AAGGCGATAA GGCCGATCAT TCCTATTCGT TTTGAAGAAG TTGAGATCGC TGTCAAAATC CCTTCTGAAT ATGCAGGAAA ATCCTATGGG GATATTGCAA AGTTCGGAAC CATGCTCAGG GATAACTGGG AGAATGATGG TTCATGGGTT GCTGTGGTCA AGATCCCTGC AGGGATGCAG AATGATTTTT ATGGGCTTGT GAACCATCTG ACAAAAGGTG ATGCGGAAAC AAAACTTTTG TAA
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Protein sequence | MVSLDESLVA RLKKGSKHYE VLVDPDGALE FKKGGNVKIE DILAVESIFE DSGRGDHAAE SDLTNAFQTD DVFEIAAYII KHGEIQLTKE QRKHILEEKT RQVISTIARN AINPQTRAPH PPGRIEKAME EAKVHIDPLK GVDEQVNIVM KAIRPIIPIR FEEVEIAVKI PSEYAGKSYG DIAKFGTMLR DNWENDGSWV AVVKIPAGMQ NDFYGLVNHL TKGDAETKLL
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