Gene Mbur_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0197 
Symbol 
ID3997164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp179653 
End bp180345 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID637958034 
Productputative RNA-associated protein 
Protein accessionYP_564957 
Protein GI91772265 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1500] Predicted exosome subunit 
TIGRFAM ID[TIGR00291] rRNA metabolism protein, SBDS family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000236585 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATCTC TTGATGAATC ATTGGTTGCA AGGCTAAAGA AAGGCAGCAA ACATTATGAA 
GTGCTTGTGG ATCCTGATGG GGCTCTGGAA TTCAAGAAAG GAGGCAATGT TAAAATTGAG
GATATTCTTG CAGTGGAGTC CATCTTCGAG GATTCGGGCA GGGGAGACCA TGCGGCAGAA
TCCGATCTTA CCAATGCATT CCAGACCGAT GATGTTTTTG AAATTGCAGC GTATATTATC
AAACACGGCG AAATTCAGCT TACTAAGGAA CAGAGGAAAC ATATTCTTGA GGAAAAGACC
AGACAGGTCA TTTCCACCAT TGCACGAAAT GCGATAAATC CTCAAACGAG GGCACCTCAC
CCTCCTGGAA GGATCGAGAA GGCAATGGAA GAGGCAAAGG TCCATATCGA TCCTCTGAAG
GGTGTGGATG AACAGGTCAA TATTGTCATG AAGGCGATAA GGCCGATCAT TCCTATTCGT
TTTGAAGAAG TTGAGATCGC TGTCAAAATC CCTTCTGAAT ATGCAGGAAA ATCCTATGGG
GATATTGCAA AGTTCGGAAC CATGCTCAGG GATAACTGGG AGAATGATGG TTCATGGGTT
GCTGTGGTCA AGATCCCTGC AGGGATGCAG AATGATTTTT ATGGGCTTGT GAACCATCTG
ACAAAAGGTG ATGCGGAAAC AAAACTTTTG TAA
 
Protein sequence
MVSLDESLVA RLKKGSKHYE VLVDPDGALE FKKGGNVKIE DILAVESIFE DSGRGDHAAE 
SDLTNAFQTD DVFEIAAYII KHGEIQLTKE QRKHILEEKT RQVISTIARN AINPQTRAPH
PPGRIEKAME EAKVHIDPLK GVDEQVNIVM KAIRPIIPIR FEEVEIAVKI PSEYAGKSYG
DIAKFGTMLR DNWENDGSWV AVVKIPAGMQ NDFYGLVNHL TKGDAETKLL