Gene Mbur_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0083 
Symbol 
ID3996769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp73103 
End bp75394 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content38% 
IMG OID637957925 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_564853 
Protein GI91772161 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.172925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACTATT TCGAAAATAT GCCCATCCGA AAACGACTGA TCATTTACAT CGTTATTGGA 
ACATTTCTTG TGCTCATAGC ATCAAGTTCA CTTATTATAT CAGCTTCAAC AGCTCAACAC
GAAGAGTATG CATATTTAAA TTCTGTAGAG ACAGCAAAAA AATATGCCAA TCAGTTCAAC
AGTGATATGA TAAGAAGCCA TAGCATTGGG AAAACAATCG CTTATTCAAT GACAGTTGAT
ACGGAGCGAG ACAGAGATAA AGCAAATATG GTCCTTCGGG AAATTCTTGT TCAGAACCCG
GAACTTATTG GAACATATGC CTGTTTTGAA CCCAATGCAT TCGATGGGAA AGATATAGAA
TATGCCAACA CTTCTGCTCA TGATTCCACA GGCAGATTTA TCCCATACTG GAACAAATTA
AATGGTTCCT TAACATTAGA TCCTTTGCAG GACTACGAAG AATTTGATTA TTACGCATTA
CCAAAATCAT TAAAGACCGA TGTGATCACT GAACCTTACT GGTACGATGA TCAAATAATC
ATTAGCTACT CAACACCCAT ATTCTCTGAT GACGAGTTCA TAGGGATAAG TGGAGTTGAT
GTATCACTGA ACTATCTTGA CAATATCGTT AGCGACATCA CCATATTTGA TTCGGGTTAT
GCTTTTCTTA GCAGCAACAA AGGGGTGATA TTGACACACC CTACCGAGAA GGTTTGGATA
GGTAACAACT CCCTGTGCGA ATTCGATGGC AATGTCTATG AAATGTCAAA AGATATCGAA
GACGGTAAAA GTGGACACAT CGAGACAATT GATTCTACTA CTGGAAAAGA AGTGGTCATT
TATTATGAAC CATTGACAGA AGGAAACTAT TCATTCGTAC TTGTAGTCCC TAAAAATGAA
ATGCTTGCGG GAGTTGTTTC TTTAAGGAAT GAACTTGCAT TATTCTCAGC GCTCGCAATT
ATGTTTATGG GAATTGTCGC GTTCCTAACC GCCAATACGA TAAACAGAAG GATCGAAGAT
ATTGTAGATG ACTTCGAACA AATATCAGAT TCTGCATTGA ATGGGAACCT AAAAGTCAGA
GCAAATACAA AGATAGGGAT CGATCTCAAA AGGATCCCAA TTGGCCTGAA CGAACTCCTT
CGCAATCTTG AAAAGTCACA CGAACTTAAT GAAGAGATGA ACAACATCAT AGAACATAGC
CCGGTAACTG TGTTCAAGTG GAAAAATGAA AAAGGCTGGC CTGTGGAGCT TGTTTCTGAG
AATATAACTC AATTCGGCTA CAATGCTGAT GATTTTCTCT CAAAACAAAT GGATTATGCA
GACATAATCC ATCCTGATGA TGTAGGCCGT GTAGAAGACA GACTTGGAGA AAGTCTGAAA
AGGCATGTTC CAAATTTCAT CAGCCAATAC AGGATAATAT CTAAATCAGG AGAGATATTC
TGGGTCGAGG AACAGACTCT TTCCCATGCC GATCAAAACG GTGATACAAA ATACCTGCAC
GGAATAATCG TTAACATAAC TAAAAGGAAA AAAGCAGAAG ACATGGTAAT TCAGGCTAAA
CTGGATGCTG AAGCCACAAA CAGAACAAAA AGTGAATTCC TTGCTAACAT GAGCCACGAG
CTAAGGACAC CCTTGAACTC TATCATCGGT TTTTCGGAAC TTCTTCTAGA AAAGACCATC
GGAGACATTA ATAATAAACA AGAAAGATAC ATCAGTAATA TCCTGACTGG TGGTCAGCAC
CTGTTAAGCC TTATCAATGA GATTCTCGAC ATCTCAAAAG TAGAGTCCGG AAAGATGGAA
CTACATTATG ACGAGTTTGC GATAAGTAGC ATGATATCAG ATATAGTGAT ACTATTGAAC
CCACTTGCAA TAACTAATAG GATTGAAATA ATCACAGATA TCGATAAAAG GCTTTCATTG
ATCAATGCAG ACAAAATCAA AATAAAGCAG ATACTATACA ACTTATTAAG TAACGCTATT
AAATTCACTA ATGAGAATGG TACCATTTCC ATAGAAGCGA TCTTTGATGA CAAACTTATG
CAAATATGCA TAAAGGATAA TGGAATTGGA ATCGAAAAGG AAAACATCGA AAAACTTTTT
CAACCATTCC AGCAGATAGA TTCCGCGGCT TCAAGAAAAT ACCAGGGCAC CGGACTGGGA
CTTGCTCTTG TCAAGAACTT TGTTGAAATG CACGGAGGAA ATATATGGGT AGATAGTGAA
ATGGGCAAAG GAAGTGCATT CACATTCACC ATTCCAATAA ATGGGATAGA AGGACGGAAT
AATGAACAGT AA
 
Protein sequence
MNYFENMPIR KRLIIYIVIG TFLVLIASSS LIISASTAQH EEYAYLNSVE TAKKYANQFN 
SDMIRSHSIG KTIAYSMTVD TERDRDKANM VLREILVQNP ELIGTYACFE PNAFDGKDIE
YANTSAHDST GRFIPYWNKL NGSLTLDPLQ DYEEFDYYAL PKSLKTDVIT EPYWYDDQII
ISYSTPIFSD DEFIGISGVD VSLNYLDNIV SDITIFDSGY AFLSSNKGVI LTHPTEKVWI
GNNSLCEFDG NVYEMSKDIE DGKSGHIETI DSTTGKEVVI YYEPLTEGNY SFVLVVPKNE
MLAGVVSLRN ELALFSALAI MFMGIVAFLT ANTINRRIED IVDDFEQISD SALNGNLKVR
ANTKIGIDLK RIPIGLNELL RNLEKSHELN EEMNNIIEHS PVTVFKWKNE KGWPVELVSE
NITQFGYNAD DFLSKQMDYA DIIHPDDVGR VEDRLGESLK RHVPNFISQY RIISKSGEIF
WVEEQTLSHA DQNGDTKYLH GIIVNITKRK KAEDMVIQAK LDAEATNRTK SEFLANMSHE
LRTPLNSIIG FSELLLEKTI GDINNKQERY ISNILTGGQH LLSLINEILD ISKVESGKME
LHYDEFAISS MISDIVILLN PLAITNRIEI ITDIDKRLSL INADKIKIKQ ILYNLLSNAI
KFTNENGTIS IEAIFDDKLM QICIKDNGIG IEKENIEKLF QPFQQIDSAA SRKYQGTGLG
LALVKNFVEM HGGNIWVDSE MGKGSAFTFT IPINGIEGRN NEQ