Gene Mbur_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0078 
Symbol 
ID3996764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp66871 
End bp68085 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content42% 
IMG OID637957921 
Producthypothetical protein 
Protein accessionYP_564849 
Protein GI91772157 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000923125 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGT TTTCACAGGC TCTGCATCTA TCAATCGGTA GTATCAGTAG CTACAAGCTG 
CGATCGGCAT TAACAACTCT TGGTATAATC ATAGGGATAG CTGCTGTTGT TGCAAATGTA
TCTCTTGGTG CAAGTTTTAA TCAGTTCTTT GTTGATGAGC TTGGGTCTCA GGGCTCGAAC
TTCATTGTCA TCTATAATGA GGACATCAAT CTATTCTATG ACAATCAGCT TGAAGCTATA
AGGAACACTC CAAAGGTCGA AGGTGTTTCA CCTATCCGGC AGCAGTTGGC GGGTGTTACT
TATATCAGTA CTATCAGACA GATCGATATA CAAGGGAGCT CGGCCGATTA TGAAAAGATC
GGCAATATAC AGTTGGAGGC TGGGAATTTC TTTTCGGATC AGGATAAGTA TGCTGCTGTA
TTGGGTTCAG ATGTTGCATA CGAAAAATTC GACCAGAAGA TATCATATCG CAATTCTATC
GATATTGAGT TCATACGCAG GGATGGTACA CCTGTAGAAC ACAGTTTCAA AGTAATTGGT
ATCATTGATA GCCCCGATAC TACTTTTATA CAGACCGGTG CTGAATCCGA TGTAAGGATA
TTCATTCCCA TAAATACGAT GAACGAGATG CTGGGAATTG AGGATTATGG AGGATTTTCA
ATAACAGTTG AAGATGCTGA GTCGGTACGT CCTGTTTCTG ATGAGATCGA TAAGAAGATC
GCCAGAAGCC TGGGAGTTTC TGAAAGGGAG CTTGATAATG AGGATGTAAA ACCTTATACT
ATATTCAATC AGGCTGACAT TCTTGATCAG CTTGATGAGC TCTCAACTGG TCTTACCTCT
CTTTTTATCT CAGTTGCACT TATCTCATTG ATAGTCGGTT CCATTGGGAT CATGAACATT
ATGCTTGTGA CAGTTACCGA AAGGACGAAA GAGATCGGTC TGTTAAGGTC ATTGGGTTTT
ACGAGGTCAA ATATACTTTC CCTTTTTATC ACAGAATCAA TAATACTCGG GCTTATAGGG
GGGATCTTGG GAACTTTTCT GGGCTTGGTC GGCTCTTATG CTGCAGTGAC CATCCTTGGT
CTGCCTTATA TTTTCCCCAT GTACCTTTTT GTTCTGGGCG TTGGAATAGC AGTTGGTGTA
GGGCTGATCG CAGGTGTCTA TCCTGCAAAT AAAGCTTCAA AGCTTGACCC TGTGGATTCT
TTAAGAAAGG GCTGA
 
Protein sequence
MLKFSQALHL SIGSISSYKL RSALTTLGII IGIAAVVANV SLGASFNQFF VDELGSQGSN 
FIVIYNEDIN LFYDNQLEAI RNTPKVEGVS PIRQQLAGVT YISTIRQIDI QGSSADYEKI
GNIQLEAGNF FSDQDKYAAV LGSDVAYEKF DQKISYRNSI DIEFIRRDGT PVEHSFKVIG
IIDSPDTTFI QTGAESDVRI FIPINTMNEM LGIEDYGGFS ITVEDAESVR PVSDEIDKKI
ARSLGVSERE LDNEDVKPYT IFNQADILDQ LDELSTGLTS LFISVALISL IVGSIGIMNI
MLVTVTERTK EIGLLRSLGF TRSNILSLFI TESIILGLIG GILGTFLGLV GSYAAVTILG
LPYIFPMYLF VLGVGIAVGV GLIAGVYPAN KASKLDPVDS LRKG