| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0062 |
|---|
| Symbol | |
|---|
| ID | 3997189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 50274 |
|---|
| End bp | 51032 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637957906 |
|---|
| Product | peptidase A24B, FlaK-like |
|---|
| Protein accession | YP_564834 |
|---|
| Protein GI | 91772142 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAC TATTGAAAGT GCTTGTTTGT CTGCTATTTC TCCTTTACTC CTGCTATTCA
GATATTAAGA CACGAAGGGT CACTAACAAG CTCTGGCCAA TAATGCTCGG TGCAGCAGCC
CCATTAATCA TCTATGATAT CGCACGATAT GGCATTCCCT ACGTAAAATG GACACTCATA
TCGTTCATAT TTATATTCGT GTTCGTTTAC ATATTGTTCT ATTTCGGAGC CTTCGGTGGT
GCAGATGCCA AAATATTGAT GGTGATATCA TTGATACTGC CAATCTATCC TGCACTGGAG
CTGATCAGCT ACCATTTGCC TGTAGCAGGT ATGCCCCCCA TTGGCCTTTT CACATTCAGT
GTCTTTGGGA ACTCGGTCAT ACTCACCGTG GTCGTACCGC TGGGACTTTT CCTCTACAAC
CTCACGCAAC CAACCCTGAA AGATACTCTT AAGAGACCTC ATTACATGTT CATTGGATAC
AGATCATTGA TCAAAGACCT TGAAAGGCCC CACATTCGCC TTATTGAACA ATACGAGGAG
AACGATGGGA TCGTATCACA TCGATTCACA ACAGGGGGAA TGCAGCTTGA TGAGGATACA
ATCGCTATGA TGAAGGAATA TGATAAAAAT GGACTCATTG AGAAAAGGAC ATGGGTAACC
CCAGGACTCC CATTCATGAT ACCCATAACT GCCGGTTTCA TCAGTGCAGT GATTTATGGA
GACCTTATAT TCCAATTGAC ACTTCATTTA TTACTATAA
|
|---|
| Protein sequence | MIELLKVLVC LLFLLYSCYS DIKTRRVTNK LWPIMLGAAA PLIIYDIARY GIPYVKWTLI
SFIFIFVFVY ILFYFGAFGG ADAKILMVIS LILPIYPALE LISYHLPVAG MPPIGLFTFS
VFGNSVILTV VVPLGLFLYN LTQPTLKDTL KRPHYMFIGY RSLIKDLERP HIRLIEQYEE
NDGIVSHRFT TGGMQLDEDT IAMMKEYDKN GLIEKRTWVT PGLPFMIPIT AGFISAVIYG
DLIFQLTLHL LL
|
|---|
| |