Gene Mbur_0037 details

Gene Information

• Locus tag: Mbur_0037
• Symbol: rps4p
• ID: 3996901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 25462
• End bp: 26016
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637957880
• Product: 30S ribosomal protein S4P
• Protein accession: YP_564811
• Protein GI: 91772119
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATATC CAGGTAAAAG TACAAAGAGC TATGACACTC CACAACATCC ATGGCAAGCA 
GAAAGGATGG CATCCGAGGT CGAGCTCGTT AAGAAGTATG GTCTCCGTAA CAAAAGGGAA 
CTCTGGAAAT CACTCAGTGT TCTGAGAAGG TTCAGGGGAG ATGCAAGACG TCTTCTTGCA 
GAGTCCGCAG AATCTGATCT TATAGGTCAC TCAAAGACCG AAGCTGATCA GCTCCTTACA 
AAACTTATCA GGTTCTCAAT TCTCAAATCT GATTCCAATA TCGATGATGT TCTTGGTCTC 
CAGACCGAGG CTATTCTGGA GCGCAGGCTT CAGACCCAGG TCCACAGACT TGGACTCGCC 
CGCACCGCAC GTCAGGCAAG GCAGTTCATT ACACACGGAC ATATCGCTAT CGATGGTAAG 
AGGGTAACAG TCCCTGGTAT GATGGTAACA AGGGAGCAGG AGATGAATGT CGAATATTAC 
GGTACATCAC CTATGACCAA GGAATCTCAT CCAGAGAGGC CTGCACAGAT CGCAGCATCA 
GTGGTTGAGG AATAA 

 

Protein sequence

MAYPGKSTKS YDTPQHPWQA ERMASEVELV KKYGLRNKRE LWKSLSVLRR FRGDARRLLA 
ESAESDLIGH SKTEADQLLT KLIRFSILKS DSNIDDVLGL QTEAILERRL QTQVHRLGLA 
RTARQARQFI THGHIAIDGK RVTVPGMMVT REQEMNVEYY GTSPMTKESH PERPAQIAAS 
VVEE