Gene Mbur_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0024 
Symbol 
ID3996887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp12037 
End bp13515 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content45% 
IMG OID637957866 
Productpreprotein translocase subunit SecY 
Protein accessionYP_564798 
Protein GI91772106 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00318334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTAA GGGAGAGTTT GGAACCGATT TTTAATAGAT TGCCCGCCGT AGCTAGTCCG 
GAAGGGCATG TGCATTTTAA AAACAAGTTA ATGTGGACTC TTGGAATACT TGTGCTTTAT
TTCGCTCTGG CGAATATTCC ACTGTTTGGT CTTTCAAGTG ATTCTATTGA CCTGTTCGAA
CAATATCGTG CTTTCTTCGC AGGAGCATCT GGTTCTTTGA TGCTGTTGGG TATAGGTCCT
ATTGTTACCG CATCTATCGT ACTTCAGCTT CTTGTTGGTG CTGATGTTAT CAAACTCAAT
ATGTCCGATC CTGCAGACCA GGCATTCTTC CAGGGTGCAC AGAAATTTAT GGTCTTTGTC
ATGATTATTC TTGAAGCTCT GCCACAGATA GTTGGTGGTT ATATCCAGCC TGATGCTGGT
GTAGCATCAG CACTTGGAGT AGGGCTCGGA GCCGTTACTG CGATCATCTT TATCCAGATC
TGTATTGGTG GAGTTCTTAT CCTCTTTATG GATGAGATCG TTTCAAAATG GGGAATTGGT
TCCGGTGTAG GACTTTTCAT CGTGGCCGGT GTTTCCCAGC AGATCGTAAC AGGTCTGTTC
AATTGGGGTC TTGACACTAC GGGTCTTCCA ATTGGTATCC TTCCGAAATG GATATACATA
GTCCAGAATG TGGGGTTGGA TTACATCGCG ACCAGTGAAG GCGTAATGTT CCTGCTCATT
AGAGGTGGGA TACTTGCACT GATCAGTACA GTAGCTATAT TCCTAATGGT CGTGTTCGTG
GAGAGTACTC GTATCGAGAT ACCTCTTGCA CATAGTGCAG TGAGAGGTGC TAGAGGCAGA
TTCCCCGTAA AACTTATATA TGCTTCAGTT CTTCCGATGA TCCTTGTAAG GGCACTTCAG
GCAAACCTTC AGATGATAGG TCTGCTGCTT TCAGGACGTG GTATCAACGT ACTTGGTGAA
TATTATGGTT CAACGCCTAT CAACGGCATC ATGTATTATA TTTCACCGAT TAACAGTCCT
TATGACTGGA TCCCATCACT CGTGAGGGAA ACGTTCACTG GATATGGTGC TCCTGTTCCA
TCAATGTGGC AGGTCGGGTT GCATGTGTTC GTTGATGCGT TCTTCTTGAT CGCAGGTGGT
ATCATATTCG CTCTGTTCTG GATCGAAACG ACCGGAATGG GTGCAAAACC AACGGCTCAA
AAGGTATTCA ATTCAGGTAT GCAGATCCCA GGTTTCAGGC GTAATGTCGG AAGTATCGAG
AAAGTAATGC TCAGGTACAT CCCGAAGGTC ACTATCATTG GTGGTGCTTT CATTGGTGTA
CTGACACTTC TGGCAAGTTT GCTCGGTACC ATTGGTGGTG CTGGAGGTAC TGGATTGTTG
CTTACAGTAA GTATTGTGTA TCGCCTGTAT GAGGACATTG CATCTGAACA GATGATGGAA
ATGCATCCAA TGGTCAGATC ATTCTTCGGA CAGGAATAA
 
Protein sequence
MSLRESLEPI FNRLPAVASP EGHVHFKNKL MWTLGILVLY FALANIPLFG LSSDSIDLFE 
QYRAFFAGAS GSLMLLGIGP IVTASIVLQL LVGADVIKLN MSDPADQAFF QGAQKFMVFV
MIILEALPQI VGGYIQPDAG VASALGVGLG AVTAIIFIQI CIGGVLILFM DEIVSKWGIG
SGVGLFIVAG VSQQIVTGLF NWGLDTTGLP IGILPKWIYI VQNVGLDYIA TSEGVMFLLI
RGGILALIST VAIFLMVVFV ESTRIEIPLA HSAVRGARGR FPVKLIYASV LPMILVRALQ
ANLQMIGLLL SGRGINVLGE YYGSTPINGI MYYISPINSP YDWIPSLVRE TFTGYGAPVP
SMWQVGLHVF VDAFFLIAGG IIFALFWIET TGMGAKPTAQ KVFNSGMQIP GFRRNVGSIE
KVMLRYIPKV TIIGGAFIGV LTLLASLLGT IGGAGGTGLL LTVSIVYRLY EDIASEQMME
MHPMVRSFFG QE