Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0001 |
Symbol | rpl3p |
ID | 3996831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 379 |
End bp | 1392 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957843 |
Product | 50S ribosomal protein L3P |
Protein accession | YP_564775 |
Protein GI | 91772083 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0115454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG GACACAGACC AAGGCGCGGT TCACTTGCAT ACAGTCCACG CAAGCGATCA CAAAGCCACA TACCAAGGTT TAGATCATGG CCAGAGTCAG ACGCTGAACC AAAGCTTCAG GGCTTTGCAG GTTACAAGGT AGGCATGACC CATGTAATCA TGATCGACGA CGTTAAGCAT AGTCTTACAG AGGGTACTGA AATATCCGTT CCTGTTACTA TCATCGAAAC TCCAGCTATC CGTGTTGCAG CAATTCGTGC ATATGGCAAA GACACCTATG GTGAAATCGC TATTGCAGAA GCATGGACAG ACGTTCTTGA CAAGGATCTT AGCCGCAGGC TCAAGACCGC AAAGAACCCT GATGTGAATG CATCACTTGA GAAGCTTGAG ACTCTTGTTG AAAGCGGACG TGCAAATGAT ATCAGGCTCA TCACATACAC TTTACCATCC ACTCTTACTG GTGTACCTAA AAAGGTACCT GATGTGATGG AAACTGGTGT AAGTGGTTCT GATGTGAAAG CAAAGTTCGA GTATGCTAAG ACAGTTCTGG GTACAATGGT GGAGATCTCT GATGTATTCG ACAACGGCAA GATCGTCGAT GTCGCAGCGA TCACAACCGG GCATGGTACA CAGGGTCCTG TAAAGAGATG GGGCATCAAT CTAATGAAGA ACAAACACTC CCGTCAGGGA AGTTTGAGAC AGGTAGGTAC ACTCGGTCCA TGGACTCCTG CACACGTGAG CTGGAGAGTT CCACAGGCAG GTCAGATGGG TTATCACCAG AGAACCGACT ACAACAAGAG GATCTTGAAG ATGTCCTCTG ATGTTGATGA GGTCAATCCA GCTGGTGGTT TTGTTAACTA CGGTCTTGTT CGTGGAAACT ACATCCTTAT CAAAGGAAGT GTTCCAGGTC CATCCAAAAG GTTGATCAGA CTCAGGGAGC CAACAAGGTC AAAGGTATCC AGCATTGGCG AGCCTCAGAT CATGCACGTT AGCACTCAAA CACTGCAGGG GTGA
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Protein sequence | MAKGHRPRRG SLAYSPRKRS QSHIPRFRSW PESDAEPKLQ GFAGYKVGMT HVIMIDDVKH SLTEGTEISV PVTIIETPAI RVAAIRAYGK DTYGEIAIAE AWTDVLDKDL SRRLKTAKNP DVNASLEKLE TLVESGRAND IRLITYTLPS TLTGVPKKVP DVMETGVSGS DVKAKFEYAK TVLGTMVEIS DVFDNGKIVD VAAITTGHGT QGPVKRWGIN LMKNKHSRQG SLRQVGTLGP WTPAHVSWRV PQAGQMGYHQ RTDYNKRILK MSSDVDEVNP AGGFVNYGLV RGNYILIKGS VPGPSKRLIR LREPTRSKVS SIGEPQIMHV STQTLQG
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