| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3775 |
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| Symbol | |
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| ID | 4020337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4543095 |
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| End bp | 4544720 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957839 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_564771 |
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| Protein GI | 91795120 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000106175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCTC AACGCAATAT ATTGCTTATC GGTTTGTTGT TTGTCAGTTT TTTACTTTGG
CAACAGTGGC AAACAGATAA TGCGCCGCAA GTAGCGGCTC CACAAACACA AGTTAAATCC
CACGTTTCAG CTGAAACTAG CTCAGATGTA CCTGAAGCCG ATGGCAGTGT GAGTACAGCT
GTTGTGGCTT CAACAAATCT TATCAATGTC ACCACAGACC AACTGGTAAT AAAAATTAAT
CCACTGGGTG GCGATATTGT TTATGCAGCA TTAGTTAAGC ATAAGACTGA AATCGATAAG
AATGACCCTT TCATATTGCT CGAGCAAAGC AGTGATTTTA ACTATATCGC TCAGAGTGGC
CTGATTGGCC GTGATGGTAT TGATAGCAGC ACTAAAGGCC GCGCTCAATT CACCACCACC
TCAAGTGACT TCAGCTTAGC CGATGACCAA GACAAACTCA CAGTACCACT TACTTTAGTG
ACTGATACTG GCGTTCGTTA CACTAAGGTA TTTACTTTTA CTCGTGGTCA ATTTGATGTT
GGCGTCGACT ATCAAGTAAA CAACACCTCT GATAAGTCAC TGCAATTGCA GATGTACGGT
CAAATCAAGC AAACCATCAA GCCTACCGAA GGTAGCATGA TGATGCCGAC TTACCGTGGT
GCAGCTTTCT CTACCTCTGA TGTGCGTTAT GAGAAGTATG ACTTCGAAGA CATGGCTGAC
ATGAACTTAA GCAAGTCGAC CTTAGGTGGT TGGGCGGCTA TGTTACAGCA CTACTTCGTA
TCCGCTTGGA TCCCACCTGC GACAGATGCC AATACCATCT TCTCTAGTGT CAGTGCCGGT
GGTTTTGCCA ACATAGGTTT CCGTGGTGCT GTTTATGATG TCGCCCCGGG TAGCGAGCAG
AGCATAAGCG CTCAGTTTTA TGTGGGCCCT AAAGATCAAA AAGCCCTTTC TGCCATTTCA
GAAACCTTAA ATCTCGTTGT AGATTATGGT TTCCTATGGT GGTTAGCGAT TCCTATTTAT
AAGTTACTGA TGATATTCCA ATCACTAGTA ACTAACTGGG GTATCGCTAT TATCTTAATC
ACCTTAACAG TGCGTGGTTT GTTATACCCA CTGACTAAGG CTCAGTATAC CTCTATGGCT
AAGATGCGTA ATCTACAGCC TAAGCTTGCT GACATGAAAG AACGTTTTGG TGATGACCGT
CAGAAGATGG GTCAGGCCAT GATGGAGCTC TACAAGAAAG AAAAAGTAAA CCCTATGGGT
GGCTGTTTAC CTATCTTGTT ACAGATGCCT ATCTTCATCG CACTCTACTG GGTATTGCTA
GAAAGCTACG AGCTACGTCA CGCTCCATTC ATGTTGTGGA TTAATGACTT ATCGGTTCAA
GATCCTTACT ACGTGCTGCC ATTACTTATG GGTGTGTCTA TGTGGTTAAT GCAGAAAATG
CAACCGATAG CGCCAACCAT GGATCCAATG CAAGTTAAGA TGATGCAGTG GATGCCTGTT
ATCTTTACGG TATTCTTCCT CTGGTTCCCA GCAGGTCTAG TGCTTTACTG GTTAGTGGGT
AACTTAGTGG CCATCACTCA GCAAAAGATT ATTTATGCAG GTCTTGAGAA AAAAGGCTTA
AAATAA
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| Protein sequence | MESQRNILLI GLLFVSFLLW QQWQTDNAPQ VAAPQTQVKS HVSAETSSDV PEADGSVSTA
VVASTNLINV TTDQLVIKIN PLGGDIVYAA LVKHKTEIDK NDPFILLEQS SDFNYIAQSG
LIGRDGIDSS TKGRAQFTTT SSDFSLADDQ DKLTVPLTLV TDTGVRYTKV FTFTRGQFDV
GVDYQVNNTS DKSLQLQMYG QIKQTIKPTE GSMMMPTYRG AAFSTSDVRY EKYDFEDMAD
MNLSKSTLGG WAAMLQHYFV SAWIPPATDA NTIFSSVSAG GFANIGFRGA VYDVAPGSEQ
SISAQFYVGP KDQKALSAIS ETLNLVVDYG FLWWLAIPIY KLLMIFQSLV TNWGIAIILI
TLTVRGLLYP LTKAQYTSMA KMRNLQPKLA DMKERFGDDR QKMGQAMMEL YKKEKVNPMG
GCLPILLQMP IFIALYWVLL ESYELRHAPF MLWINDLSVQ DPYYVLPLLM GVSMWLMQKM
QPIAPTMDPM QVKMMQWMPV IFTVFFLWFP AGLVLYWLVG NLVAITQQKI IYAGLEKKGL
K
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