| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3771 |
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| Symbol | |
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| ID | 4020333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4538318 |
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| End bp | 4540114 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957835 |
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| Product | asparagine synthase, glutamine-hydrolyzing |
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| Protein accession | YP_564767 |
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| Protein GI | 91795116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.452374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGGCC TTGCCGGAGA AATAGCCTTT GCAGGCGAAG CTGACGTGAA CCAGGTGGCT
CGAATGTTAA CCAAGCTTGC ACCTAGAGGG CCTGATGGAA CCGGGGTTTT TAGTCAGGGG
CGCTGCTGTT TCGGTCATAG ACGCCTTAAA ATTATCGACC TGTCTGAGCA AGGATCTCAG
CCCATGGTGG ATGCCACCTT AGGGCTAACC TTGGTTTTTA ATGGCTGTAT CTATAATTAC
CGCGCCTTAC GGGAGCAATT GATACATCTG GGTTATCAAT TCTTTTCCTC CAGTGACACT
GAAGTCATAT TGAAAGCCTA TGACCATTGG GGTGAGTCTT GTGTAAATCA GTTTAATGGC
ATGTTTTCTT TCGCTATTTA TGAGCGCGAT ACGGGTAAGG TTTTCTTAGC CAGAGACAGA
CTTGGCATTA AACCCTTGTA CTACTTTATT CATGATAAGG GCTTAGTCTT TGCCTCTAGC
TTACCCGCCT TATTAGTTCA CACTGAGGCG AGTACCGAAA TAGACTCAGT GGCACTCAAT
CACTATATGT GTTTTCGCGC CATAGTGACT GAGCACACCT TGTTTAAGGG CATCAAAAAG
CTCCAACCAG GTCATTGGAT GACAATATCT GCCGCTGGAG AGATTAACCA ACAGAGCTAT
TGGCAACTGG ATAACAGTGA TACCGAGCAA TATCAGATGT CACAGCCGTC AGCAGAGGCA
ATGAGTGAAG AGCTGTGGTC ACAGCAACTC GAACAAGCCT TGTATGACAG TGTCAGGCGC
AGATTAGAGG CTGATGTTCC TGTGGGAGTC TTGTTATCTG GTGGATTGGA CTCCTCACTT
TTAGTGGGGC TAATGCATGA ACTAGGGCAA AAACAAATCC ATACCTTCTC CATTGGTTTC
GATGATGTGG CGGATGAACT CGGTAATGAA TTTATTTATT CTGATGTGAT AGCAGAACAT
TACCAGACCA AGCACCAAAA AATACAGGTT AATCACGCAG AGCTGCTGCA ACATCTTCCC
GATTGCATCC TTGCTATGTC TGAACCTATG GTTTCCCATG ATGTTATTGG CTTTTACTTG
TTATCAAAAA CCGTCAGTCA GCATGTCAAA GTGGTACAGA GTGGTCAGGG GGCCGACGAA
GTGTTCGCTG GCTATCATTG GTATCCACCT ATGGTCGATG CCAGTGAGCA AATGGCGGCC
CAAGTGTATC AGGACAATTA TTTTTCTTGG CAATATGGTG AGTATCAGCA GTTGGTGACG
CCTAAGATGG CCGATGGCGA TCATGCGGGA GATTTTGTTC GTGATTACTT TGCTCAGTGC
AAAGCGACTC ATGCCATAGA TAAAGCCTTA ATGCTAGATA CCTTAGTCAT GCTGGTTGAT
GATCCCGTCA AGCGAGTCGA TAACATGACC ATGGCCTTTG GCCTTGAAGC TAGGGTGCCA
TTTCTCGATC ATAAGCTGGT GGAGCTCGCC AGCCGAATGC CTTATCAGCT TAAGATTAAA
GATGGCGGCA AGTATTTATT AAAGCAGATG GCGCGAAAGC TTATCCCCAA CCAAGTCATA
GACAGACCTA AGGGGTACTT TCCTGTACCT GGACTTAGGA ACATGCAAGG GCCCTACCTA
GCGCTCGCTA AACAAGTGTT TAGTGAACCC ATCGCCAGAA CACGGGGGAT ATTCAACTTA
GATTATATCG ATACCATGCT GGCCTCTCCC GAGCAGCAGT TGACTCGTTT CGGTTCGCGC
TTATGGCAAG TGACGTTATT AGAACTTTGG CTACAGTTAC ACTTAGATAA TCGCTGA
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| Protein sequence | MCGLAGEIAF AGEADVNQVA RMLTKLAPRG PDGTGVFSQG RCCFGHRRLK IIDLSEQGSQ
PMVDATLGLT LVFNGCIYNY RALREQLIHL GYQFFSSSDT EVILKAYDHW GESCVNQFNG
MFSFAIYERD TGKVFLARDR LGIKPLYYFI HDKGLVFASS LPALLVHTEA STEIDSVALN
HYMCFRAIVT EHTLFKGIKK LQPGHWMTIS AAGEINQQSY WQLDNSDTEQ YQMSQPSAEA
MSEELWSQQL EQALYDSVRR RLEADVPVGV LLSGGLDSSL LVGLMHELGQ KQIHTFSIGF
DDVADELGNE FIYSDVIAEH YQTKHQKIQV NHAELLQHLP DCILAMSEPM VSHDVIGFYL
LSKTVSQHVK VVQSGQGADE VFAGYHWYPP MVDASEQMAA QVYQDNYFSW QYGEYQQLVT
PKMADGDHAG DFVRDYFAQC KATHAIDKAL MLDTLVMLVD DPVKRVDNMT MAFGLEARVP
FLDHKLVELA SRMPYQLKIK DGGKYLLKQM ARKLIPNQVI DRPKGYFPVP GLRNMQGPYL
ALAKQVFSEP IARTRGIFNL DYIDTMLASP EQQLTRFGSR LWQVTLLELW LQLHLDNR
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