| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3714 |
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| Symbol | |
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| ID | 4020276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4454990 |
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| End bp | 4456465 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957778 |
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| Product | nitrate transporter |
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| Protein accession | YP_564710 |
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| Protein GI | 91795059 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTTG AAAGCCGCTT TAACCTGTTT TCATTCAGCG GAAAAATGAA GGTGCTGCAC
TTAAGCTGGA TGGCATTTTT TATCACCTTT GCAGTGTGGT TTAACTTTGC TCCCATGCTG
CAGTCCGTTA AAGAAAGCCT AGGGTTAACT TCAGAGCAAA TTAAAACTTT ATTGATCCTC
AACGTGGCCT TCACGATTCC TGCAAGGGTT GTGGTTGGCA TGCTTACCGA CAGGTTCGGC
CCTCGATTAG TGTATTCGGC GTTATTAGCT ATCTGCGCCT TGCCGTGTTT CGCCTTTGCC
CTTGCGGATA CCTTTGTTCA AGCGGCTATT GCCAGATTCT TACTGGGCTT TATTGGTGCA
GGTTTTGTAG TAGGCATTCG CTTGGTGTCT GAGTGGTTTC CCCATAACGA ACTGGGCACG
GCTGAAGGTA TTTATGGTGG TTGGGGTAAT TTTGGCTCGG CGGCTGCGGC TTTTTGTTTA
CCTGCCTTGG CGCTAGCCTT TGGTGGCGAT GATGGCTGGC GCTATGCCAC AGGCATAACT
GGCTTGATGA GCTTAGGCTT TGCTCTGGTG TTTTATTTTA ACGTCGAAGA TACCCCCAAG
GGGGCAACCT ACTTTAAACC TAAAAGCCTT AAGGCCATGG AGGTGACTTC TAAAGGCGAC
TTCTTGTTAC TACTTGTGAT GAAACTACCT TTGTACGGCG CCTTGGCATT GCTGGCTTGG
AAGCTGTCAC CGACTGGGGT TGCGATGCTC AGTGACACCG CTGTTATTAG TGTGTACCTA
GGATTAGCCT TGCTGTATTG CTACGAAGTG CTGCAAGTAT GGCAAGTAAA CAAGATTATT
TTTACTGAGC CAGTGGCTGC AATCCATCAA TACAAGTTTA AGCAGGTGGC GGTATTGAAC
GTACTCTACT TTGCGACTTT TGGATCTGAG CTGGCAGTGG TGTCCATGTT GCCGTTATTT
TTTGCTGAAA CCTTCGAGTT AACCCCAGTT GTTGCGGGCA TGGTGGCGTC GGCTTATGCC
TTTATGAACT TGATGTCACG CCCAGGTGGC GGCTGGATCT CAGATAAATT TGGCCGTAAA
CCGACACTGT TAATCCTCAC CGCTGGCCTT GCTGCTGGGT ACTTTCTCAT GGGGCAAGTC
AACAGTGATT GGCCTTTGTG GGTTGCCGTT GCTGCAGCGA TGGCGTGCTC CTTCTTTGTG
CAATCCGGTG AGGGCGCGGT GTTTGCGACT GTGCCCTTAA TTAAGCGCCG CATGACAGGG
CAAATTGCTG GCATGACCGG AGCCTATGGC AATGTGGGCG CCGTGTGTTA CTTAACTGTG
CTGTCTTTTG TGGATTACAG CAGCTTTTTC TACGTGATAG CGGCAACGGC GGTGCTGGGA
TTTTGCGTGC TGTGGTTTAT GGAGGAGCCG CAAGGGCAAA TGGCAGAAGT GAACCACGAT
GGCAGCGTGA CCTTAATCGA TGTCTCGAGT CGTTAG
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| Protein sequence | MSLESRFNLF SFSGKMKVLH LSWMAFFITF AVWFNFAPML QSVKESLGLT SEQIKTLLIL
NVAFTIPARV VVGMLTDRFG PRLVYSALLA ICALPCFAFA LADTFVQAAI ARFLLGFIGA
GFVVGIRLVS EWFPHNELGT AEGIYGGWGN FGSAAAAFCL PALALAFGGD DGWRYATGIT
GLMSLGFALV FYFNVEDTPK GATYFKPKSL KAMEVTSKGD FLLLLVMKLP LYGALALLAW
KLSPTGVAML SDTAVISVYL GLALLYCYEV LQVWQVNKII FTEPVAAIHQ YKFKQVAVLN
VLYFATFGSE LAVVSMLPLF FAETFELTPV VAGMVASAYA FMNLMSRPGG GWISDKFGRK
PTLLILTAGL AAGYFLMGQV NSDWPLWVAV AAAMACSFFV QSGEGAVFAT VPLIKRRMTG
QIAGMTGAYG NVGAVCYLTV LSFVDYSSFF YVIAATAVLG FCVLWFMEEP QGQMAEVNHD
GSVTLIDVSS R
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