Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3649 |
Symbol | |
ID | 4020206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4368276 |
End bp | 4368938 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637957710 |
Product | flagellar hook capping protein |
Protein accession | YP_564647 |
Protein GI | 91794996 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTGA CTAATGCGAA GGAAAGCCAA GGGAGTCACA CTGCCAATGT ATTGCAGTCC CCTGGCAATG ATGCTGCTTC GTTAAAAAAT GAATTTATGA CCTTGATGAT TGCCCAAATC AAGAATCAAG ATCCCACCAA ACCTATTGAA AGCGCTGAGT ATGTGTCGCA GTTAGCTCAA TTTTCTCAGG TAGAAAGTTT GGAGTACATG CGTAAAAACC AATCATCGCA AATGGTGATG ATGGAAAACT TAGGCATAGT GCAGTCGGCT TCACTCATTG GTAAGAGCGC CACTGTGCCA GCGTCCAATC TACAGCTCGG TACTGAGCCT ATAGAAGGTA AAGTCTTTTT AGACAATGCC GTAGAAGACT TAACCATTGA GGTGGTTAAT CAGCAGGGGC AAGTGGTCCA CAGTTTAAAA ATGGGTGCTC AAGGTAAGGG AGATATTCAA TTTGCTTTTG ATCCGACCGC CGCTGGCTTG GCTGAGGGCA AATATGAGCT TAAGGCTAAG GCGACTGTCG GTGAATCCGT GCTAATCGCC CCGACGTATG TGAAAGCTGA GATAGAGAAA ATCCATTTTT CTAGCGCTTC AGGAATGATG ATGGCCGAAA TGAGTAACGG CTTAGGCATA GTTCCTGTGC TAAACATTTC TGAAGTTTCT TAA
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Protein sequence | MQVTNAKESQ GSHTANVLQS PGNDAASLKN EFMTLMIAQI KNQDPTKPIE SAEYVSQLAQ FSQVESLEYM RKNQSSQMVM MENLGIVQSA SLIGKSATVP ASNLQLGTEP IEGKVFLDNA VEDLTIEVVN QQGQVVHSLK MGAQGKGDIQ FAFDPTAAGL AEGKYELKAK ATVGESVLIA PTYVKAEIEK IHFSSASGMM MAEMSNGLGI VPVLNISEVS
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