Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3643 |
Symbol | flgJ |
ID | 4020200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4363283 |
End bp | 4363702 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637957704 |
Product | peptidoglycan hydrolase |
Protein accession | YP_564641 |
Protein GI | 91794990 |
COG category | [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3951] Rod binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTTG AGAATGCAGG CGGTTACCTA GCAGGCCTTA ATGCCAGCGA CTTGATTAAA ACTAATGGTG AGCAAGGCGC ATTAAGGGTG GTAAGCCAAC AGTTTGAAGC GCAATTTTTG CAAACCGTGC TCAAACAGAT GCGCTCAGCT TCAGATGCTA TGGCGGATGA AGACAGTCCG TTCTCATCTA AAAATGATGG GCTATATCGT GACCTTCACG ACGCCGAGTT GGCGATGCAG TTGAGTAAAT TGCAGACCAT GGGCTTGTCT GAGGTGATGA CTAAACAATT ATCCGGTGCA CTTAAGTCAA ACCATGAAGT GGTCGCCTTG CAGATAGATA AGCCACACCA AGCAATGACC ACTACCGCGA TGCAACCTGC GTTAATCATG CCTAAGCTCG CCAAGGATAC TCCAGAATGA
|
Protein sequence | MKLENAGGYL AGLNASDLIK TNGEQGALRV VSQQFEAQFL QTVLKQMRSA SDAMADEDSP FSSKNDGLYR DLHDAELAMQ LSKLQTMGLS EVMTKQLSGA LKSNHEVVAL QIDKPHQAMT TTAMQPALIM PKLAKDTPE
|
| |