Gene Sden_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3643 
SymbolflgJ 
ID4020200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4363283 
End bp4363702 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID637957704 
Productpeptidoglycan hydrolase 
Protein accessionYP_564641 
Protein GI91794990 
COG category[M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3951] Rod binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG AGAATGCAGG CGGTTACCTA GCAGGCCTTA ATGCCAGCGA CTTGATTAAA 
ACTAATGGTG AGCAAGGCGC ATTAAGGGTG GTAAGCCAAC AGTTTGAAGC GCAATTTTTG
CAAACCGTGC TCAAACAGAT GCGCTCAGCT TCAGATGCTA TGGCGGATGA AGACAGTCCG
TTCTCATCTA AAAATGATGG GCTATATCGT GACCTTCACG ACGCCGAGTT GGCGATGCAG
TTGAGTAAAT TGCAGACCAT GGGCTTGTCT GAGGTGATGA CTAAACAATT ATCCGGTGCA
CTTAAGTCAA ACCATGAAGT GGTCGCCTTG CAGATAGATA AGCCACACCA AGCAATGACC
ACTACCGCGA TGCAACCTGC GTTAATCATG CCTAAGCTCG CCAAGGATAC TCCAGAATGA
 
Protein sequence
MKLENAGGYL AGLNASDLIK TNGEQGALRV VSQQFEAQFL QTVLKQMRSA SDAMADEDSP 
FSSKNDGLYR DLHDAELAMQ LSKLQTMGLS EVMTKQLSGA LKSNHEVVAL QIDKPHQAMT
TTAMQPALIM PKLAKDTPE