Gene Sden_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3624 
Symbol 
ID4020181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4345439 
End bp4345987 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content47% 
IMG OID637957685 
Producthypothetical protein 
Protein accessionYP_564622 
Protein GI91794971 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.104079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCA GCAAGAAAAC ACGCAAGGGC GGCGAAAACG CCCCCAAACT AGCCCCTAGA 
GTCAAGAAGC AAGACCGTAA AGTGGTTGAT GGCAAACGGG CAGAAACAGG CCGTAAATCT
GGCGGCCGCC ACAATGAGAC CTTGTTGATG CAACAGTCTC CTAACGGTAC TCAGGCTAAG
AAAAAAGATC CACGTCACGG CAGTAAAAAG CCAGTGGCCT TAGACTTACC CACGAGCATA
GCCGAGCCCA TAAAGGCCAA GACGCCTCAG CCAAAGCTCA GCGATGAGCA AAAGCTACTT
AAACTTGAAG AAGATCCTAG ACTAAACAGC CTGCTAGACA TGCTAGAAGA AGGCCGTGAC
CTCTCGGATG CCGATCAGAA GTGGTTAGAT GGCCAATTAA CTAAGATTGA ACAATTAATG
AAAAATCTAG GCATTACAGA TGCCGATGAC ATGCCGGCAA AGCAGCATAA ATCTTCTTCT
GATGAAGATT TATTGTCTCG TTTCGAATCT GGTGAAAGCC TATTAAAAGA CTACCTAACC
AAAGACTAG
 
Protein sequence
MARSKKTRKG GENAPKLAPR VKKQDRKVVD GKRAETGRKS GGRHNETLLM QQSPNGTQAK 
KKDPRHGSKK PVALDLPTSI AEPIKAKTPQ PKLSDEQKLL KLEEDPRLNS LLDMLEEGRD
LSDADQKWLD GQLTKIEQLM KNLGITDADD MPAKQHKSSS DEDLLSRFES GESLLKDYLT
KD