| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3613 |
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| Symbol | |
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| ID | 4020170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4332062 |
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| End bp | 4333381 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957674 |
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| Product | three-deoxy-D-manno-octulosonic-acid transferase-like protein |
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| Protein accession | YP_564611 |
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| Protein GI | 91794960 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0068831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGCAT TGGCAGACAA ATTCTATCCT GTCGTAAAAC ATCTGATGAA TCGTCATTTA
TATTCAGCGC TATTGTATCT TCTTTCTCCA TTACTCTTGG TCTATTTGAG CCTGCGAGCC
TTCAAGAGCC CAGATTATCG TGGCCGCTGG GGCGAGCGTT TCGGTTTGAG CAAGTTAAAC
TCAAGCCAGG TATTGATCCA TAGCGTTTCC ATGGGCGAGA CCCTAGCGGC GATACCTTTG
ATTAAAGCGT TAATGAAGGC GCATCCCGAG TGGCACTTTA CTGTTACCAC CACCAGCCCA
ACGGGTTCGG TCCAGGTACG CAAAGCCTTT GGCGATACAG TGCAGCATTG CTATCTACCC
TTCGATCTCC CTTTTAGTGT AAAGCGCTTC TTAAAGCAGC TTAAACCTGA GCTGTGCATC
ATTATGGAAA CCGAATTGTG GCCTAATTTA GTCCATCAAG CACATAAGCG CGGCTGTAAG
TTAGTGTTAG CCAATGGCCG CTTGTCACAA AAATCTGCGG ATAAATATGC CAATTACCCT
AAGTTAAATC GGCCCATGTT GCAGTCCTTA GATGTTATTG CGGTGCAGAC GCAGGCAGAG
GCAGAGCGCT TTATTGCCCT TGGGGTTGAC GCTAGGCGGG TACAAGTGTG TGGCAGTTTA
AAGTTTGATT TGCAGATAGA TGATGCTAAA CGCCAGCAGG CAAGAGTATT GCGCCAGCAG
TGGCAACGAA CGGTTGAACC TGTGTGGGTG GCGGGTAGCG TGCATCCGGG AGAGTTTGGC
GCCATATTAA CCGCACATAA GCACATTTTG GCACGCTTCC CTAAGGCCTT GCTTATCATG
GCGCCGCGCC ATCCTGAGCA ATTTGAGTTG GCGGCGAGCA CTGTCAGTCA AGCAGGGCTG
CAGCTTGCAA GACGTAGCAC TGAGCAAAAG ATGAGTGCCG ATACTCAGGT ATTACTTGGG
GATACCATGG GAGAGCTATT GATGCTCTAT GGCTGTGGCG ATCAAGCGTT TGTGGGCGGC
ACCTTGATTG AAAATGGCGG CCATAATCCT TTGGAGCCAG CGGCCATGGG GCTCTCTGTC
TGTGTTGGTC CTCATCATTG GGACTTTACG CAGATTACTC AGTTGCTGGT CGAGGCCGGT
GGCTTAACTG TGGTGGACTC GGCAGAGACA TTGGCCGCGC ATTTACTTAG CCTATTTGAA
CAAGCCGATT TAGCCCAGCA AGCCTCAAAG GCGGCAATCG CCGTGGTTGA AGAAAATCGC
GGCGCCTTAG TTAAGCAGTT AGCCGTTATT GAGCGTTATG GCTCATCCGT AGCGAATTAA
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| Protein sequence | MLALADKFYP VVKHLMNRHL YSALLYLLSP LLLVYLSLRA FKSPDYRGRW GERFGLSKLN
SSQVLIHSVS MGETLAAIPL IKALMKAHPE WHFTVTTTSP TGSVQVRKAF GDTVQHCYLP
FDLPFSVKRF LKQLKPELCI IMETELWPNL VHQAHKRGCK LVLANGRLSQ KSADKYANYP
KLNRPMLQSL DVIAVQTQAE AERFIALGVD ARRVQVCGSL KFDLQIDDAK RQQARVLRQQ
WQRTVEPVWV AGSVHPGEFG AILTAHKHIL ARFPKALLIM APRHPEQFEL AASTVSQAGL
QLARRSTEQK MSADTQVLLG DTMGELLMLY GCGDQAFVGG TLIENGGHNP LEPAAMGLSV
CVGPHHWDFT QITQLLVEAG GLTVVDSAET LAAHLLSLFE QADLAQQASK AAIAVVEENR
GALVKQLAVI ERYGSSVAN
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