Gene Sden_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3598 
Symbol 
ID4020155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4313183 
End bp4313416 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content46% 
IMG OID637957659 
Producthelix-turn-helix type 3 
Protein accessionYP_564596 
Protein GI91794945 
COG category[K] Transcription 
COG ID[COG3655] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTA TTATTGAATT AGATGTTGTC TTAGCTAAGC GCAAGATGAA GTCTACAGAA 
CTGGCTGAAT TGATTGGCAT TACACCACAG AACTTATCGG TACTTCGCAG CGGGCGAGCC
AAAGCCATTC GCTTTTCAAC CCTCGATGCC ATCTGCATGC ATTTACAGTG CACACCTGGG
GACATTTTGG CGCATGTAGA CCCTGATGAC AGCTGCAATG TGATTGATGA CTAG
 
Protein sequence
MAIIIELDVV LAKRKMKSTE LAELIGITPQ NLSVLRSGRA KAIRFSTLDA ICMHLQCTPG 
DILAHVDPDD SCNVIDD