Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3568 |
Symbol | |
ID | 4020125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4284769 |
End bp | 4285062 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957629 |
Product | cytochrome c, class I |
Protein accession | YP_564566 |
Protein GI | 91794915 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.199847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TGTTATCAAT GGCGGCTATT GTTGCTTTGA GTTTAACGGC AAGCGTTTCA GCCCAAGATG GTGAAACCGT TTATAATAAA GCCTGCCAAG TATGCCATAG TATGGGTGTA GCCGGAGCGC CTAAGGTTCA TGACGCCGCA GCTTGGGAAC CGCGTCTCGC TAAAGGGATG GATACATTAG TTGCCTCGAT CAAGACGGGT ATGAGCGCCA TGCCACCAGG CGGCATGTGT ACCGACTGTT CAGATGAAGA CTATAAAAAC GCTATCGAGT TCATGGCGAA GTAA
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Protein sequence | MKKLLSMAAI VALSLTASVS AQDGETVYNK ACQVCHSMGV AGAPKVHDAA AWEPRLAKGM DTLVASIKTG MSAMPPGGMC TDCSDEDYKN AIEFMAK
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