Gene Sden_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3545 
Symbol 
ID4020099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4256571 
End bp4257284 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID637957603 
Productcopper resistance B precursor 
Protein accessionYP_564543 
Protein GI91794892 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3667] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0320075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACA CAAGTTTAGC GTCTGTCGTG TTTATGGCAC TGACGATGAC GCTCACAAGT 
ACTATGGCCC ATGCCGGCGG AGATGATGAT CCCTTGCTTG CCAAGCTCAT GTTAGAAGAG
CTGGAAACAG GAGTTGAAAC AGATGCTCCA ATCAACTTCA GTGGCCAAGC TTGGGTTGGC
CATGACATGC ATAAGCTGTG GTTTAAAACC GAGGGTGAGT ATCAACGCCG TGATGCTCAA
GATGTAGAGC TTCAGGCGCT CTATAGTCGG CCTATAGCAC CCTACTGGGA TCTACAGCTG
GGACTTAGAG TGGATATTGA GCCATCACCC ACTCGTAATT GGGCCGTGGT CGGGGTTCAA
GGGCTAGCAC CGTATTTTTT TGACGTCGAT GCCGCGCTGT TTATTGGTGA AGAAGGCCGC
AGTGCACTGC GTTTGAGCGC TGAGTATGAA TTGTTAATTA CTCAAAAACT CATCCTCAGT
CCAGAAATTG AAATGAACCT TTATGGCAAA GACGATATGG ACGTGGGTAT TGGCTCAGGG
CTCGCGGACG TGGGGGCTGG GCTGCGATTG AGGTATGAAA TAGTGCGAGA ATTTGCTCCT
TATATTGGAG TGGACTGGAG TCAGAAATTC GGCAATACCG CAGACTTTGC TCGGGCCGAG
GGAGAGGATA CTCAGGAGAC GCAATTTGTT ATTGGCCTCA GGGCCTGGTT TTAA
 
Protein sequence
MSNTSLASVV FMALTMTLTS TMAHAGGDDD PLLAKLMLEE LETGVETDAP INFSGQAWVG 
HDMHKLWFKT EGEYQRRDAQ DVELQALYSR PIAPYWDLQL GLRVDIEPSP TRNWAVVGVQ
GLAPYFFDVD AALFIGEEGR SALRLSAEYE LLITQKLILS PEIEMNLYGK DDMDVGIGSG
LADVGAGLRL RYEIVREFAP YIGVDWSQKF GNTADFARAE GEDTQETQFV IGLRAWF