Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3545 |
Symbol | |
ID | 4020099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4256571 |
End bp | 4257284 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637957603 |
Product | copper resistance B precursor |
Protein accession | YP_564543 |
Protein GI | 91794892 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3667] Uncharacterized protein involved in copper resistance |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0320075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAACA CAAGTTTAGC GTCTGTCGTG TTTATGGCAC TGACGATGAC GCTCACAAGT ACTATGGCCC ATGCCGGCGG AGATGATGAT CCCTTGCTTG CCAAGCTCAT GTTAGAAGAG CTGGAAACAG GAGTTGAAAC AGATGCTCCA ATCAACTTCA GTGGCCAAGC TTGGGTTGGC CATGACATGC ATAAGCTGTG GTTTAAAACC GAGGGTGAGT ATCAACGCCG TGATGCTCAA GATGTAGAGC TTCAGGCGCT CTATAGTCGG CCTATAGCAC CCTACTGGGA TCTACAGCTG GGACTTAGAG TGGATATTGA GCCATCACCC ACTCGTAATT GGGCCGTGGT CGGGGTTCAA GGGCTAGCAC CGTATTTTTT TGACGTCGAT GCCGCGCTGT TTATTGGTGA AGAAGGCCGC AGTGCACTGC GTTTGAGCGC TGAGTATGAA TTGTTAATTA CTCAAAAACT CATCCTCAGT CCAGAAATTG AAATGAACCT TTATGGCAAA GACGATATGG ACGTGGGTAT TGGCTCAGGG CTCGCGGACG TGGGGGCTGG GCTGCGATTG AGGTATGAAA TAGTGCGAGA ATTTGCTCCT TATATTGGAG TGGACTGGAG TCAGAAATTC GGCAATACCG CAGACTTTGC TCGGGCCGAG GGAGAGGATA CTCAGGAGAC GCAATTTGTT ATTGGCCTCA GGGCCTGGTT TTAA
|
Protein sequence | MSNTSLASVV FMALTMTLTS TMAHAGGDDD PLLAKLMLEE LETGVETDAP INFSGQAWVG HDMHKLWFKT EGEYQRRDAQ DVELQALYSR PIAPYWDLQL GLRVDIEPSP TRNWAVVGVQ GLAPYFFDVD AALFIGEEGR SALRLSAEYE LLITQKLILS PEIEMNLYGK DDMDVGIGSG LADVGAGLRL RYEIVREFAP YIGVDWSQKF GNTADFARAE GEDTQETQFV IGLRAWF
|
| |