Gene Sden_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3539 
SymbolenvZ 
ID4020093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4250232 
End bp4251548 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content50% 
IMG OID637957597 
Productosmolarity sensor protein 
Protein accessionYP_564537 
Protein GI91794886 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.128591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGAA AATGGTGGCG CCGCTTCCTT CCCCATAGCG CCTTTAGTCA GACTGTGGTC 
CTAATAGGCA GCCTGCTGCT GATTAATCAG CTGGTGTCTT ACCTGTCTGT GACTGTGTAT
TTTATCAAGC CCAGTTACGA GCAAATCAAC CAGCTCATTG CCAGACAAAT CAATCTCTTA
TTTGTCGATG GTGTCGAGGT AGGGCGCGAG CATTTAACCA TAGTCGATGC CCTCAATGCC
AAGGTGCGCG ATGATGGCAT GCGCTTTTAC AGTCAAAGGC AAGCCGAGCG AGCTGGGGTC
GAGCAGGCCA CCTACTATGG TTTTCTGTCG GATCAAATGT CGATTTATTT AGGCGGTAAA
GCCGATGTTA GACTCTCACA AGGCAGTGAG ATGCAAGTGT GGATCCGCCC GCCTCAAGCG
CCATCCTTAT GGATAAAGGT GCCACTGGCA GGCTTTAATG AGTCAGACTT ATCGCCATTA
ACCTTATACC TTATCGTCAT CGGCGCCTTG AGTGTCGCCG GGGGATGGTG GTTCGCACGC
CAGCAAAATA GACCATTGAA ACGCCTGCAA AAAGCGGCGT TAACTGTGTC CAAGGGGGAC
TTCCCCGATC CTTTACCCCT GAAAGGTTCC ACCGAAATTG TCGAAGTGAC TCATGCCTTC
AATCATATGG CGCAAAGCAT GAAACAATTG GAGCAAGACA GGGCCTTGCT GATGGCGGGC
ATTTCCCACG ACCTTCGCAC CCCTTTGACC CGAATTCGCC TCGCCTCTGA GATGATGGTC
GAGGAAGATC AATATCTTAA AGAAGGCATA GTCACAGATA TCGAAGACAT GGATGCCATC
ATTAATCAAT TTATTGCCTA CATTCGCCAC GACAGGGAAA CCCCCAGAGA GCCAGATCAG
ATCCACAGGC TTATCCAAGA AATCGCCCAA CAAGAAATGC ACCGTGAAGG TGAGATTGAG
CTCGATTTAC AAGACTGCCC AGAGATCCCC ATGCAGAGCG TTGCCATTAA GCGGGTGCTC
AGTAATTTAG TGGAGAATGC CTTCAGATAC GGTAATGGTT GGATAAAAAT CAGTGCTTAC
AGTGAGCGTA ATTATGTCTG TTTTAGTGTC GAAGATAATG GCACTGGCAT TGCGGCAGAT
AAAATTGATG AACTGTTTCA GCCCTTCACC CAAGGGGACA GTGCCCGAGG CAGCATGGGT
TCAGGCCTTG GGCTTGCCAT CATAAAGCGT ATTGTCGACC GTCATCATGG CAAGGTAAAA
CTCAGTAACC GTGCCCAAGG CGGCTTATGT GCCAAAGTAT GGCTGCCTCT GGTGTAA
 
Protein sequence
MQRKWWRRFL PHSAFSQTVV LIGSLLLINQ LVSYLSVTVY FIKPSYEQIN QLIARQINLL 
FVDGVEVGRE HLTIVDALNA KVRDDGMRFY SQRQAERAGV EQATYYGFLS DQMSIYLGGK
ADVRLSQGSE MQVWIRPPQA PSLWIKVPLA GFNESDLSPL TLYLIVIGAL SVAGGWWFAR
QQNRPLKRLQ KAALTVSKGD FPDPLPLKGS TEIVEVTHAF NHMAQSMKQL EQDRALLMAG
ISHDLRTPLT RIRLASEMMV EEDQYLKEGI VTDIEDMDAI INQFIAYIRH DRETPREPDQ
IHRLIQEIAQ QEMHREGEIE LDLQDCPEIP MQSVAIKRVL SNLVENAFRY GNGWIKISAY
SERNYVCFSV EDNGTGIAAD KIDELFQPFT QGDSARGSMG SGLGLAIIKR IVDRHHGKVK
LSNRAQGGLC AKVWLPLV