| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3524 |
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| Symbol | |
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| ID | 4020078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4215378 |
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| End bp | 4216283 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957582 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_564522 |
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| Protein GI | 91794871 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC CTCTTATCAT TCCAGCCCAA AGCATGAGTT TCTCGCTATC TTGGCGTGAT
TACTTCGAAA TGACCAAGCC CAAGGTGGTC GCTTTGATGC TACTGACAGT GTTAGTGGGC
ATGTGTTTGG CCCTGCCGGG CGCAGTGCCC TTGCAACCTT TAGTCTTTGG CATGCTGGGC
ATTGCCATGA TGGCAGGTTC GGCCGCGGCC TTTAACCATC TTATCGATCG CCGCATCGAT
GGCTTGATGG CACGCACCTA TAATCGCCCG CTGCCCAAGG GAAAGTTATC GGTCAACAAG
GCCTTTAGTT TTGCCTTCTC ACTCGGGGTA CTGGGTTTTG TGCTGCTGTA TTGGTGGGTG
AACCCACTAA CAGCTTGGCT CACCTTTGCC AGTTTAATCG GCTATGCCGT GGTCTATACC
GCCTATTTAA AACGCGCAAC CCCGCAAAAT ATCGTCATCG GCGGTCTTGC GGGCGCCATG
CCGCCACTAC TTGGCTGGAC TGCGGTCACC AATGAATTAC ACGGTAATGC GCTATTGTTA
GTGATCATCA TTTTCACTTG GACGCCGCCC CATTTCTGGG CGCTGGCCAT CCACAGAAAA
GCCGAATACG CCAAAGTAGA CATCCCCATG CTACCTGTGA CTCATGGAGT GGAATTCACT
AAGACCTGCA TCTTGCTGTA CACTTTCCTG CTAGCACTCG CCTGTTTGTT GCCTGTGCTT
GTGGGCATGT CAGGCCCTGT GTATTTAGTG GGCTCGAGCA TCTTAAGTTG CGGCTTTATC
TATAAGGCGT GGCAGCTTAA ATACCAAGAT GAGCCAGGGC TTGCGATGAA GGTATTTAAG
TTCTCCATCT ATCATTTAAT GCTGTTATTT GTCGTCTTAT TGGTCGATCA TTACTTATGG
GGTTAA
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| Protein sequence | MAKPLIIPAQ SMSFSLSWRD YFEMTKPKVV ALMLLTVLVG MCLALPGAVP LQPLVFGMLG
IAMMAGSAAA FNHLIDRRID GLMARTYNRP LPKGKLSVNK AFSFAFSLGV LGFVLLYWWV
NPLTAWLTFA SLIGYAVVYT AYLKRATPQN IVIGGLAGAM PPLLGWTAVT NELHGNALLL
VIIIFTWTPP HFWALAIHRK AEYAKVDIPM LPVTHGVEFT KTCILLYTFL LALACLLPVL
VGMSGPVYLV GSSILSCGFI YKAWQLKYQD EPGLAMKVFK FSIYHLMLLF VVLLVDHYLW
G
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