Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3515 |
Symbol | |
ID | 4020069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4206652 |
End bp | 4207269 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637957573 |
Product | LexA repressor |
Protein accession | YP_564513 |
Protein GI | 91794862 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCGT TAACGCCACG CCAAACTGAG ATTTTAGAGC TAATCAAACG CAATATCGCC GATACAGGTA TGCCACCGAC TCGGGCAGAA ATTGCGACTC GTCTTGGTTT TAAAAGTGCC AATGCTGCCG AAGAACATCT AAAGGCCTTG GCTAAAAAAG GCTGTATCGA AATCATGCCT GGCACGTCCA GAGGGATCCG CTTAACTCAA GAGGATGCTG AAGTTGAATT GGGCTTGCCC TTGATAGGCC AAGTGGCTGC AGGTGAACCT ATTCTGGCTC AAGAGCATGT TGAACAGTAT TTTCAAGTTG ACCCCCATAT GTTTAAACCT GCAGCAAATT TTCTGCTTAG GGTCCGTGGC GACAGCATGA AAAATATCGG CATACTCGAA GGCGATTTGC TGGCGGTGCA TAAGATGCAA GAGGCCAAAA ATGGCCAAGT GGTGGTCGCT CGTGTTGAAG ATGATGTCAC GGTAAAGCGT TTTGAGAAAA AAGGTAATGT GATTTATTTG CATGCTGAAA ACGAAGATTA TGCACCAATA AAAGTCGATT TAACCTGCCA AAGCCTCACG ATTGAAGGGC TTGCTGTTGG CGTCATACGT AACGGAGCTT GGTTATGA
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Protein sequence | MRPLTPRQTE ILELIKRNIA DTGMPPTRAE IATRLGFKSA NAAEEHLKAL AKKGCIEIMP GTSRGIRLTQ EDAEVELGLP LIGQVAAGEP ILAQEHVEQY FQVDPHMFKP AANFLLRVRG DSMKNIGILE GDLLAVHKMQ EAKNGQVVVA RVEDDVTVKR FEKKGNVIYL HAENEDYAPI KVDLTCQSLT IEGLAVGVIR NGAWL
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