Gene Sden_3475 details

Gene Information

• Locus tag: Sden_3475
• ID: 4020029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 4159561
• End bp: 4160184
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637957533
• Product: response regulator receiver
• Protein accession: YP_564473
• Protein GI: 91794822
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAT TACTGGCAGA AGATCAGGCC ATGGTGCGCG GCGCCTTAGC GGCCCTATTA 
AGCTTGGGCG GTTTTGCTGA CATCACTCAG GCAGAGGATG GTGAGCAGGC TTTGCAGCTA 
CTCAAGCAAC ATGCCCTCAG CCAGCAGCCC TTCGATTTAC TGCTCACCGA CATAGAAATG 
CCCGGCCGCA CTGGCCTTGA ACTGGCACAG TGGCTGCGGG ATAACCAAGG TGATGCCAGC 
CCAAAAACTA AGGTAATCGT GCTGACCACC TTTGGTCGCG CCGGGTACAT TAAGCGCGCC 
CTTGAGGCCG GGGTGAATGG CTTCTTACTC AAGGACGCAC CGTCCGATGA CCTCATTCAC 
GCCATTAAGC AAGTCATGGC CGGTAAACCC GTTATCGCGC CAGAGCTTGC GGTGCTCGCC 
ATCGGCGATA TCGACCCATT AAACGACAAG GAGCGCCGCG CCTTGCGTCT GGCCAGTGAA 
GGTAAATCCA CTGCCGACAT CGCCGCCAGT CTGTTTATCG TCGAAGGCAC GGTACGCAAT 
TATTTATCTG AGGCCATCGC TAAGCTTAAC GCCGCTAATC GCATCGATGC CGCCCGCATC 
GCCCGCCAAA AAGGCTGGCT CTGA 

 

Protein sequence

MKILLAEDQA MVRGALAALL SLGGFADITQ AEDGEQALQL LKQHALSQQP FDLLLTDIEM 
PGRTGLELAQ WLRDNQGDAS PKTKVIVLTT FGRAGYIKRA LEAGVNGFLL KDAPSDDLIH 
AIKQVMAGKP VIAPELAVLA IGDIDPLNDK ERRALRLASE GKSTADIAAS LFIVEGTVRN 
YLSEAIAKLN AANRIDAARI ARQKGWL