| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3461 |
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| Symbol | |
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| ID | 4020015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4142197 |
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| End bp | 4142877 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957519 |
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| Product | response regulator receiver |
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| Protein accession | YP_564459 |
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| Protein GI | 91794808 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000124466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA TTTTATTGAT CGACGATGAC CATGGGCTTT CAGAATTATT AGCCCAATTA
CTTGAGTTAG AAGGCTTTAG CTTAACCCAA GCCTATGATG GTCAGCAGGG TCTGGATAAT
GCGCTCAAGC AAGAATTCGA TTTAATTTTA CTGGATGTCA TGCTGCCAAA ACTCAATGGT
TTTGACTTAC TCAAGGCCTT GAGGCAACAC AAACAAACCC CAGTGCTGAT GCTCACCGCC
AGAGGGGATG AAATAGACAG GGTGGTTGGC CTTGAAATTG GCGCCGATGA TTACCTACCT
AAACCCTTCA ACGACAGGGA GCTGGTTGCA AGAATACGTG CCATTCTTCG CCGGGCGCAG
AAACCCGCTA ACGAACCCCG CGACGAGCTC AAGTGTGGTG ATATTAAATT AGATCCCGCC
CGCCAAGAAG TTAGCTGTAA AGAACAGCTC ATCTTACTGA CTGGTACTGA GTTTTCTTTA
CTACACGCTC TGATAAAACA GGCCGGTGAG TTAGTCAGCA AAGAGACGTT AAGCGAAACC
GTGCTGCACA AAAAACTCAT GCCCTTCGAT AGAAGCCTGG ACATGCATCT ATCAAATTTG
CGTAAGAAAT TCCCCGAGCG CGCCGATGGT CGCCCTAGAG TGAAAACCAT ACGCGGCCAA
GGTTATATTT GGATCCCATG A
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| Protein sequence | MNRILLIDDD HGLSELLAQL LELEGFSLTQ AYDGQQGLDN ALKQEFDLIL LDVMLPKLNG
FDLLKALRQH KQTPVLMLTA RGDEIDRVVG LEIGADDYLP KPFNDRELVA RIRAILRRAQ
KPANEPRDEL KCGDIKLDPA RQEVSCKEQL ILLTGTEFSL LHALIKQAGE LVSKETLSET
VLHKKLMPFD RSLDMHLSNL RKKFPERADG RPRVKTIRGQ GYIWIP
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