| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3460 |
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| Symbol | |
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| ID | 4020014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4141375 |
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| End bp | 4141920 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957518 |
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| Product | spheroplast protein y precursor, putative |
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| Protein accession | YP_564458 |
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| Protein GI | 91794807 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000066442 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAT TTAATAATCC AGTTAAAATG AACAGGTTTG CTGCCAAGGT TGGCGTGTTG
GTGCTGTTAG CAGGCTCAGT CTTGTTAGTG AGTCAGGTTC AGGCCACAAC CACTGAGCTT
GAAGCCCAAG GCGCGACCCA AGACAAGGGT GAATATAGAA CCTTTGAGCA CAAGGCCGGT
CACAAGGGGG AACGCCATAG CGGCCACCGT GGTGGCATGC TTAGGATGTT GCATAAGCTG
GAGTTAACCG AGGCGCAAAA AGCCGAAGTG AAACTTGTGA TGGAGAAATA TCAGCAGGGC
GGTGAGCGTC CCACTCAAGA GCAGCGTGAA GCCCACAGAG CCCAAGTGTT AAGCCTTATT
ACTCAAGCTA ATTTTGATGA AAATGCGGCG CAAAATCTAG TGCTTGAAAA GCAGCAACAG
CATCAAGCTG CCATGGTCAA TAAGCTTAAG ATGCAAAATG AAATCTATCA GTTACTTAAT
GAGGAGCAAA AAGCACAATT TACCACACAC TTTACAAAAA TGGCGGCTAA ACACAGTCGC
CGCTAA
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| Protein sequence | MNTFNNPVKM NRFAAKVGVL VLLAGSVLLV SQVQATTTEL EAQGATQDKG EYRTFEHKAG
HKGERHSGHR GGMLRMLHKL ELTEAQKAEV KLVMEKYQQG GERPTQEQRE AHRAQVLSLI
TQANFDENAA QNLVLEKQQQ HQAAMVNKLK MQNEIYQLLN EEQKAQFTTH FTKMAAKHSR
R
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