| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3437 |
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| Symbol | |
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| ID | 4019985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4106540 |
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| End bp | 4108207 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957489 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_564435 |
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| Protein GI | 91794784 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.915272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGT CGATGGAAAA CTTCATTAAG ACCCCGATAC AAATGTTGTC CCATTGGGTC
GAGACCCAAG GCGACCAAGT CTATTTACGC CAGCCTATAG AAGGTAAGTT TAAAAATTTA
ACCTGGCGTG AGGTTCAGCA ACAAGTGCAT AAAATTGCTG GAGCCTTACG TCATCTTGGA
CTGGCGCCTG GTGACAAGGT GGCTCTCCTG TCTAAAAACT GCGCCGAGTG GTTTATTGCC
GATCTGGCCT TAATGCAAGG GGGATATATT AGTGTGCCCA TTTACCCGAC GGCCAATACT
GAAACCATAC GCTATGTGCT TGAACACAGT GGCGCTAAGG CTATTTTTGT CGGCAAGCTA
GACCACTGGA GCGAGCAAGA AGAAGCCATT GGTGGCGACT TGCTTCGCTT AGCCATGCCC
TATGAAACCA TGCCATCTCA ATATCAATGG GATCAACTGC TGAATTTAGG CTCCCCCTTA
GTAGAAGCGC CTACCACTAA GCCAGATGAT GTCATGACGC TTATCTATAC CTCGGGCTCC
ACCGGCAAAC CCAAGGGTGT CATTCAAACA TTTGCCAGCT ATGGCTGGAC CTGTGAAGCC
GTGGTCAGAG ATTTACGCAC TAACACTCAA GACAGCTTAC TCTCATACCT ACCCTTAGCG
CATATCACCG AACGTGTGGC GGTTGAAGGC TCATCATTTC TTTCAGGTTC GACCGTGTCT
TTCGTTGAAA GTTTAGATAC CTTTGTGGCA GATGTGAAAC GAGCCAAGCC TACGGTATTC
TTCTCTGTTC CACGATTGTG GACCTTGTTC CATCTGAATA TCATCAATAA GATTGGCGCT
AGCAGACTTA AATTACTGCT GAGGATCCCT ATCGTCAGCA GCATAGTGAA ACACAAGATC
CAAAAGGAAT TAGGCTTAGA ACACTGCCGT CTTTTGGGCT CGGGTTCTGC ACCAATTCCG
GCATCTCTCA TCCAGTGGTA TCACAATCTA GGCATGGATA TCTGTGAAGC TTGGGGCATG
ACGGAAAACT GCGCTTACTC CATCATCAAC TACCCTTTCG ATGCCAATAA AATTGGCTCT
GTGGGCCGCC CTGTTGAAGG CTGTCTAGTG CGCCGGGGCA ATGATGGTGA GTTGCTATTA
AAAACCCCAG GACTGATGAC AGGCTATTAC CTGCAAGAGG AAGCCACCAA AGCCGCATTC
GATGATGATA GCTACTTCCG CACCGGTGAT ATTTGTGAAA TCGATGCCGA TGGCTGCATC
AGCATCACGG GACGCGTCAA AGATAACTTC AAAACCTCTA AAGGCAAGTA TGTCGCCCCA
GTGCCCATCG AACGTAAATT AGCGCAAGAC TCACACATAG AACTTATTTG TGTGATTGGC
TCGGGCTTAC CTCATCCTGT GGCCTTAGTG CAGCTCTCAG AAGGCGCATC ACTGCAGGCC
CGTGAAGAAG TACGTACCTC GATTAAGGCC ACCTTAGATG CTGTGAATCC ACACCTTGAA
TCCCATGAAC ACGTCGATGC CGTGGTGGTG GTGAAAGAGC CTTGGACCAT AGAAAATGAT
GTACTGACAC CCACACTTAA GATTAAGCGT CACGTGCTAG AGAAAGCCTT TAGCGAGAAG
GTAGACGGGG TTAGAGGCGC CCAAGTTCGT TGGGAAGATG AATTATAA
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| Protein sequence | MELSMENFIK TPIQMLSHWV ETQGDQVYLR QPIEGKFKNL TWREVQQQVH KIAGALRHLG
LAPGDKVALL SKNCAEWFIA DLALMQGGYI SVPIYPTANT ETIRYVLEHS GAKAIFVGKL
DHWSEQEEAI GGDLLRLAMP YETMPSQYQW DQLLNLGSPL VEAPTTKPDD VMTLIYTSGS
TGKPKGVIQT FASYGWTCEA VVRDLRTNTQ DSLLSYLPLA HITERVAVEG SSFLSGSTVS
FVESLDTFVA DVKRAKPTVF FSVPRLWTLF HLNIINKIGA SRLKLLLRIP IVSSIVKHKI
QKELGLEHCR LLGSGSAPIP ASLIQWYHNL GMDICEAWGM TENCAYSIIN YPFDANKIGS
VGRPVEGCLV RRGNDGELLL KTPGLMTGYY LQEEATKAAF DDDSYFRTGD ICEIDADGCI
SITGRVKDNF KTSKGKYVAP VPIERKLAQD SHIELICVIG SGLPHPVALV QLSEGASLQA
REEVRTSIKA TLDAVNPHLE SHEHVDAVVV VKEPWTIEND VLTPTLKIKR HVLEKAFSEK
VDGVRGAQVR WEDEL
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