| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3434 |
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| Symbol | rpoZ |
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| ID | 4019982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4103367 |
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| End bp | 4103645 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957486 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_564432 |
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| Protein GI | 91794781 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.684285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTA GACCAAATCG GCAACCGTTT TGATATGATT
TTGGTTGCTG CCCGTCGTGC ACGTCAGATA GCCGTGCAAG GCAAAGACCC TATGGTTGAT
GAGATGAACG ATAAACCTAC GGTTATCGCA CTTCGTGAAA TCGAATTAGG TCTAGTCAAT
GCAACCACAT TAGACGCAGA CGAGCGTCAA ACTGTGCGTG ATCGTGAAGC GGCTGAAGTT
GCTGCTGTTT CAGCTATTGC TGAAGGTCGC ACACTTTAA
|
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| Protein sequence | MARVTVEDAV DQIGNRFDMI LVAARRARQI AVQGKDPMVD EMNDKPTVIA LREIELGLVN
ATTLDADERQ TVRDREAAEV AAVSAIAEGR TL
|
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