Gene Sden_3433 details

Gene Information

• Locus tag: Sden_3433
• Symbol: gmk
• ID: 4019981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 4102682
• End bp: 4103305
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637957485
• Product: guanylate kinase
• Protein accession: YP_564431
• Protein GI: 91794780
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.21703
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCTC GTGGAAATCT TTTTATCGTG TCAGCCCCGA GTGGTGCTGG AAAGTCCTCT 
TTAATTACGG CACTGCTAAA AGATAAACCA CAAGATATGC AAGTCTCAGT TTCCCACACC 
ACCCGCGCAC CGCGCCCGGG TGAAGTCGAT GGTCAGCATT ATCATTTCGT CTCTGTTGAA 
CAATTTAAAG CATTAATTGC TGAAAATGCC TTTTTCGAAT CAGCCGAAGT CTTCGGTAAT 
TTCTACGGCA CTTCACGCCA AGTGATCGAA AACACCTTAA GCTTAGGCAT AGATGTGTTT 
TTAGACATAG ATTGGCAAGG CGCCCAGCAA GTCAAAAAAA TTATGCCTGA GGCCATAGGG 
GTGTTTATTC TGCCTCCCTC TAAGGCAGAA CTGGAGCGCC GCCTCACTGG TCGCGGCCAA 
GACAGCAGCG ACGTTATCGC GGCACGCATG GCACAAGCTG TGTCAGAAAT GTCACACTAT 
AATGAATATG ACTTTGTGAT AATTAACGAC GATTTTGAAC AAGCGCTAGC CGATCTTAAA 
AGCATCATTT TCAGTCAAAG ATTAACCTGT GCTAGTCAAT TCCATACGCA CAATGATATG 
CTTGTCGATC TGTTGGCAGA CTGA 

 

Protein sequence

MSARGNLFIV SAPSGAGKSS LITALLKDKP QDMQVSVSHT TRAPRPGEVD GQHYHFVSVE 
QFKALIAENA FFESAEVFGN FYGTSRQVIE NTLSLGIDVF LDIDWQGAQQ VKKIMPEAIG 
VFILPPSKAE LERRLTGRGQ DSSDVIAARM AQAVSEMSHY NEYDFVIIND DFEQALADLK 
SIIFSQRLTC ASQFHTHNDM LVDLLAD