Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3426 |
Symbol | |
ID | 4019974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4091634 |
End bp | 4092443 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637957478 |
Product | hypothetical protein |
Protein accession | YP_564424 |
Protein GI | 91794773 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGAAC TAAATCTAAA CACCTTTACC GAGTTACACT CGAGTACTGC GCCTCTGGTG CTCACCAATA TCTGGGATGC CGCCAGCGCC CTGTTAGCTC AAGCTAACGA TCAAAAAGCC CTAGCCACCA GCAGCGCAGC CATAGCTTGG GCCAATGGCT ACCCTGATGG CGATGTCCTG CCCATGGACA CCCTGCTCCA CGCTATGAAA AACATAATGC GCGTCGCTAA ACTGCCCGTG AGTGTTGATA TTGAATCTGG TTACAGTCAG TGTCCTGAAA AAGTTGCCCA GCTTGCCTGT GAGTTAGCCA AGTTAGGTGT CGTTGGGATC AACATAGAAG ATGGTGCACA CGCCCCTGAA CAACTCATTG AAAAAATTAC GGCGATCCGA GCGACCACAC TAGGGAAGAC ACTCTTTATA AATGCCAGAA CCGATGTTTA CTTAAGGGGA TTGGCCAAGA ATGAAATGGC GATGGAGATG ACAGCTTCAC GGTTAATCTC TTACCAAGCT GCGGGGGCTA ATTGCGGATT CATTCCAGGT AATTGTTCAG AGCTGCTGGC CAAGTATCTT GCTAAACGGG TCCATATGCC GCTGAACTTC ATGATGACCA ATGCCGATGC CGCCTTGATC AAAACGCTGC ATAGTGCGGG AATTTGCCGT TTCACCACTG GCCCCTTAAG CTTTATTAAT GCCTATACGA CCTTAACGAC AATGCCCCCC CCTAATAATG CTGTTCAAGC CGTTACCACT AAGGACAGAT TGGATTTTAA CACCATGAAC GAGATGATGG AGTCTTGTCG CCAGCCTTAA
|
Protein sequence | MSELNLNTFT ELHSSTAPLV LTNIWDAASA LLAQANDQKA LATSSAAIAW ANGYPDGDVL PMDTLLHAMK NIMRVAKLPV SVDIESGYSQ CPEKVAQLAC ELAKLGVVGI NIEDGAHAPE QLIEKITAIR ATTLGKTLFI NARTDVYLRG LAKNEMAMEM TASRLISYQA AGANCGFIPG NCSELLAKYL AKRVHMPLNF MMTNADAALI KTLHSAGICR FTTGPLSFIN AYTTLTTMPP PNNAVQAVTT KDRLDFNTMN EMMESCRQP
|
| |