Gene Sden_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3426 
Symbol 
ID4019974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4091634 
End bp4092443 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content49% 
IMG OID637957478 
Producthypothetical protein 
Protein accessionYP_564424 
Protein GI91794773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAC TAAATCTAAA CACCTTTACC GAGTTACACT CGAGTACTGC GCCTCTGGTG 
CTCACCAATA TCTGGGATGC CGCCAGCGCC CTGTTAGCTC AAGCTAACGA TCAAAAAGCC
CTAGCCACCA GCAGCGCAGC CATAGCTTGG GCCAATGGCT ACCCTGATGG CGATGTCCTG
CCCATGGACA CCCTGCTCCA CGCTATGAAA AACATAATGC GCGTCGCTAA ACTGCCCGTG
AGTGTTGATA TTGAATCTGG TTACAGTCAG TGTCCTGAAA AAGTTGCCCA GCTTGCCTGT
GAGTTAGCCA AGTTAGGTGT CGTTGGGATC AACATAGAAG ATGGTGCACA CGCCCCTGAA
CAACTCATTG AAAAAATTAC GGCGATCCGA GCGACCACAC TAGGGAAGAC ACTCTTTATA
AATGCCAGAA CCGATGTTTA CTTAAGGGGA TTGGCCAAGA ATGAAATGGC GATGGAGATG
ACAGCTTCAC GGTTAATCTC TTACCAAGCT GCGGGGGCTA ATTGCGGATT CATTCCAGGT
AATTGTTCAG AGCTGCTGGC CAAGTATCTT GCTAAACGGG TCCATATGCC GCTGAACTTC
ATGATGACCA ATGCCGATGC CGCCTTGATC AAAACGCTGC ATAGTGCGGG AATTTGCCGT
TTCACCACTG GCCCCTTAAG CTTTATTAAT GCCTATACGA CCTTAACGAC AATGCCCCCC
CCTAATAATG CTGTTCAAGC CGTTACCACT AAGGACAGAT TGGATTTTAA CACCATGAAC
GAGATGATGG AGTCTTGTCG CCAGCCTTAA
 
Protein sequence
MSELNLNTFT ELHSSTAPLV LTNIWDAASA LLAQANDQKA LATSSAAIAW ANGYPDGDVL 
PMDTLLHAMK NIMRVAKLPV SVDIESGYSQ CPEKVAQLAC ELAKLGVVGI NIEDGAHAPE
QLIEKITAIR ATTLGKTLFI NARTDVYLRG LAKNEMAMEM TASRLISYQA AGANCGFIPG
NCSELLAKYL AKRVHMPLNF MMTNADAALI KTLHSAGICR FTTGPLSFIN AYTTLTTMPP
PNNAVQAVTT KDRLDFNTMN EMMESCRQP