| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3407 |
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| Symbol | purH |
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| ID | 4019955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4064357 |
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| End bp | 4065961 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957459 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_564405 |
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| Protein GI | 91794754 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTG TCAGACCTAT TCGTCGCGCG CTGTTAAGCG TATCAGATAA AACTGGGATC
CTTGAGTTTG CCCAAGCTTT GCATGCTCAT GGTGTTGAAT TATTGTCTAC TGGAGGCACG
GCGCGTTTAT TAGCCGAGCA CGGCCTCCCT GTCATCGAAG CGTCAGATCA CACTGGGCAT
CCGGAAATTA TGGATGGTCG GGTCAAAACT TTACATCCCA AAATTCATGG TGGCATTTTA
GCGCGCCGTG GTCAGGATGA GGCTGTGATG GCTGAAAACA ACATACTGCC AATCGATCTT
GTGGTGGTGA ACTTATATCC CTTCGCTAGC ACAGTGGCCA ATCCAGATTG CACCTTGGCA
GACGCGGTTG AGAATATCGA CATTGGCGGC CCAACCATGG TGCGCGCTGC GGCTAAAAAT
CATCAAGACG TCACTATAGT CGTTAACGCG AGTGATTATG CTCGCGTATT AGCGGAAATG
AAGACTAACC AAGGTTCAAC GACCCTAAAA ATCCGTTTTG AACTCGCCGT TGCCGCCTTC
GAGCACACCG CCGCCTACGA TGGCATGATA GCCAACTACT TCGGTAACTT AGTGGCCATG
GACGCTGATA CTAGCGACGA GCAACAAGCT CTGCACCAAG AGTCTAGCTT CCCGCGCACC
TTTAATAGCC AATTTATTAA GAAGCAAGAT TTACGTTACG GTGAGAACAG CCATCAAAAG
GCCGCTTTCT ATGTGGATCC GCAGATAGAT GAAGCCTCGG TCGCCAGCGC CATTCAGCTA
CAAGGTAAGG CATTGTCTTA CAACAATATC GCCGATACCG ATGCCGCCCT TGAGTGTGTG
AAAGAATTCG ACGGCCCAGC CTGCGTTATC GTTAAGCACG CTAATCCTTG TGGTGTGGCG
CTAGGTAAAG ATTTGCTCGA TGCCTATAAC CGCGCCTACC AGACAGATCC TACCTCGGCC
TTTGGCGGTA TTATCGCCTT TAATGGTGAG TTAGATGCGG CAACCGCCAG CGCCATCGTT
GAGCGCCAAT TTGTTGAAGT CATCATAGCG CCAAGCGTGA GCCAAGCTGC TCGCGATATC
GTGGCGGCCA AAGCCAATGT GCGTTTGCTT GAGTGCGGCA AGTGGGAAAC TAAAACCACA
AGCCTAGATT ACAAGCGGGT TAATGGTGGC CTTCTAGTGC AAGACAGAGA TCAAGGCATG
GTGGGTTTAG CTGACATCAA AGTCGTGTCT AAGCGTCAAC CCACAGAGGC CGAGCTTAAG
GATTTACTCT TCTGCTGGAA GGTGGCTAAA TTTGTTAAAT CTAACGCCAT AGTGTACGCC
AAAGAAGGCA TGACAATCGG TGTGGGCGCA GGCCAAATGA GCCGAGTCTA CAGCGCTAAA
ATTGCCGGCA TTAAGGCCAG CGATGAAGGC CTAGTGGTGG AGAACAGCGT TATGGCATCG
GATGCCTTCT TCCCGTTCCG TGATGGTATA GATGCCGCAG CTGCGGCTGG CATTAGCTGC
ATCATTCAAC CGGGCGGTTC TATTCGCGAT GAAGAAATAA TCAAAGCCGC CGATGAACAC
GGCATGGCCA TGGTCTTTAC CGGTATGCGC CATTTCCGTC ATTAA
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| Protein sequence | MNTVRPIRRA LLSVSDKTGI LEFAQALHAH GVELLSTGGT ARLLAEHGLP VIEASDHTGH
PEIMDGRVKT LHPKIHGGIL ARRGQDEAVM AENNILPIDL VVVNLYPFAS TVANPDCTLA
DAVENIDIGG PTMVRAAAKN HQDVTIVVNA SDYARVLAEM KTNQGSTTLK IRFELAVAAF
EHTAAYDGMI ANYFGNLVAM DADTSDEQQA LHQESSFPRT FNSQFIKKQD LRYGENSHQK
AAFYVDPQID EASVASAIQL QGKALSYNNI ADTDAALECV KEFDGPACVI VKHANPCGVA
LGKDLLDAYN RAYQTDPTSA FGGIIAFNGE LDAATASAIV ERQFVEVIIA PSVSQAARDI
VAAKANVRLL ECGKWETKTT SLDYKRVNGG LLVQDRDQGM VGLADIKVVS KRQPTEAELK
DLLFCWKVAK FVKSNAIVYA KEGMTIGVGA GQMSRVYSAK IAGIKASDEG LVVENSVMAS
DAFFPFRDGI DAAAAAGISC IIQPGGSIRD EEIIKAADEH GMAMVFTGMR HFRH
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