Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3405 |
Symbol | |
ID | 4019953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4060933 |
End bp | 4062408 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637957457 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_564403 |
Protein GI | 91794752 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.190303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGCGC ATACTCATAA GCGTCCCACC TTGCTCGATG CATTAATCCC TATCATAGCG CTGGTTGCCA TGCTGGTTGC TGCCGTGTAT TTGTTTTCAT CGGACAGTTC ATCGGGTGCT AACCAAATCG CGCTTATTCT GGCGGCCTGT ATTGCAATCG TCATAGGTTA TAAGAATGGC TACAGCTGGA ACGAGATGGA AAAGGGCGTA GTACGCAGTG TGGGCGTCGC CACCGGCGCC TTGTTGATTT TATTCAGTGT CGGCTCCTTG ATTGGCACCT GGATTTTATC CGGCACTGTG CCCACCATGA TTTTTTATGG CATGAAAATT TTAAACCCTG ATTATTTCTA TGCCGCCTCC TGCCTACTTT GCGCCGTAGT GGCCTTAAGT ATCGGCAGTT CTTGGACCGT CGCGGGCACT TTAGGTATTG CGCTGGTGGG TATTGCCTCT GCCATGGGGC TAAGTGTTGA AATGACAGCC GGCGCCATCA TCAGTGGCGC TTATTTTGGC GATAAGATGT CGCCCATGTC CGACACCACT AACCTAGCGC CAGCGGTGGC GGGCACAGAT ATTTTCAGTC ATATCCGCCA TATGACTTGG ACCACAGTGC CCAGCATCAT CATTGCCTTG ATTGGATTTT TATTCTTAGG GCTAAATGCC GAGGCCACCC CAATTGAAAC CAGCTTAGCT GAAACCTTGG ACTTAATCGA TCGTACCTAT CAGCCTGGGG TGCATTTACT CTTTCCATTA TTGGTGGTGC TGTTTCTCGC CTTTAAGAAG ATGCCCGCCT TTCCCACCGT GATTTTAGGC ACCTTAGCAG GGGCGGCCTC GGCAGCAATT TTTCAATTCG ATAACGTGGT GAGCTTTGTT CACGATGACA GCTTGCCGCC CATGGTCGCC TTAGTAAAAG GCATCTGGAT TGCCATGTTC GATGGCTATG TGGCCAACAC AGGCGATGCG GTATTAGATA GCCTGTTAAG CCGAGGCGGC ATGAGCAGCA TGGTGACCAC GGTATGGTTA ATTCTGTGTG CCATGGCCTT TGGCGGCGTG ATGGAAGTCA CGGGTTTACT GGCGCGTATT TTGGAAAACA TTCTTAAATT AGTGACGGGG ACCAGCAGCC TTATTATCAC CACATTAGCC TGCTGTATCG GCGCCAACAT CATCACAGCG GATCAGTTTA TCGCCATCGT CTTGCCAGGG CGTATGCTAA AGCTGGAGTA CACTAAGCGT AAATTAGCAC CGGTCAACTT AAGCCGCGCC CTCGAGGATT CGGCCACTAT CACGAGCCCC TTAGTCCCAT GGAATACCTG TGGTGCCTTT ATGGCCAGCA CCTTAGGTGT GGCCACCATT GCTTATTTAC CTTATGCCTT CTTTAATCTG GTTTGCCCTT TTGTTAGTGC AGGTTATGCT TACTTTAACT TCAAAATAGA GCCATTAGTT GAAAGCGAAT CGCCAACGGC AGAAGCGGCG GTTTAA
|
Protein sequence | MPAHTHKRPT LLDALIPIIA LVAMLVAAVY LFSSDSSSGA NQIALILAAC IAIVIGYKNG YSWNEMEKGV VRSVGVATGA LLILFSVGSL IGTWILSGTV PTMIFYGMKI LNPDYFYAAS CLLCAVVALS IGSSWTVAGT LGIALVGIAS AMGLSVEMTA GAIISGAYFG DKMSPMSDTT NLAPAVAGTD IFSHIRHMTW TTVPSIIIAL IGFLFLGLNA EATPIETSLA ETLDLIDRTY QPGVHLLFPL LVVLFLAFKK MPAFPTVILG TLAGAASAAI FQFDNVVSFV HDDSLPPMVA LVKGIWIAMF DGYVANTGDA VLDSLLSRGG MSSMVTTVWL ILCAMAFGGV MEVTGLLARI LENILKLVTG TSSLIITTLA CCIGANIITA DQFIAIVLPG RMLKLEYTKR KLAPVNLSRA LEDSATITSP LVPWNTCGAF MASTLGVATI AYLPYAFFNL VCPFVSAGYA YFNFKIEPLV ESESPTAEAA V
|
| |