| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3393 |
|---|
| Symbol | |
|---|
| ID | 4019941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 4048468 |
|---|
| End bp | 4049211 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637957446 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_564392 |
|---|
| Protein GI | 91794741 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC TGATTTATGA GCAACCTTTA AATGAAAAAG TACGCAGCTA TCTGCGTCTG
GAATACTTAG CTCAGCAATT AGCCCAGGCG ATTGCCTCTG ATCAGCAGCA CAATGGCTTT
TATCCCTTGT TTTCATTATG CGAAATGACA GATAGGTGTG ATTTTCGCTC TGAAGTGCTC
AAAGATTTGG ATAGACAAAT TCTAGTGCTT AATAAATGGC AAGACTTGCC TCACGCCGAT
ACCCAGCAGA TTAATCTATT GATAAATAGA CTCAATCAAG CCAAGGGGCC ACTACAGCAA
CCAGAACGCA TTGGTGTCGC ACTCAAGCAA GATAAATTCA TTAGTGCACT TAGACAGAAG
TTTTCCATGC TGGGCGCCTG TTGTAACTTT GATTTGCCCC AACTGCACTG CTGGCTCGCC
AAATCTTGGA GTGATAGACA GCAAGATCTT ACCACTTGGC TAACTCACTA CCACCCACTG
TTAGAGCCCA TTTGTTTATT GCTGGAATTG AGCCGCAGTA CGGCTGAGTT TGTCCCCGCC
ACAGCTCACG CGGGCTTTTA TCAACAGGAT TGCACCCAAG TACTTTCTTT AGTGCGAGTT
AAGCTCACTG CAGACAGTGA GTGCTACCCG ATCATTAGTG GTCACAGAAA TCGCTTCGCG
ATCCATTTCG TTGATTTCCA GCAGCAGAAG CATTCTGACA AAAGCATTCA ATTCTTTCTG
GCTACCTGTA GCGCCAACCA TTAA
|
|---|
| Protein sequence | MKPLIYEQPL NEKVRSYLRL EYLAQQLAQA IASDQQHNGF YPLFSLCEMT DRCDFRSEVL
KDLDRQILVL NKWQDLPHAD TQQINLLINR LNQAKGPLQQ PERIGVALKQ DKFISALRQK
FSMLGACCNF DLPQLHCWLA KSWSDRQQDL TTWLTHYHPL LEPICLLLEL SRSTAEFVPA
TAHAGFYQQD CTQVLSLVRV KLTADSECYP IISGHRNRFA IHFVDFQQQK HSDKSIQFFL
ATCSANH
|
|---|
| |