| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3379 |
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| Symbol | |
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| ID | 4019927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4024965 |
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| End bp | 4027178 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957432 |
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| Product | patatin |
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| Protein accession | YP_564378 |
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| Protein GI | 91794727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGC GCGCTCCCCT GTATTTTATC TGTCTGATAC TTGCATCTAA TGTAAGTGCC
AAAGAAAGGC CCACAATAGG CTTAGTGCTC AGTGGCGGCG GCGCTAAAGG CGCGGCCCAT
ATTGGGGTGC TAAAAGTCTT AGAGGCCAAT AATATTCCAG TGGATTATAT TGCGGGTACC
AGTATTGGTG CTTATGTTGC TGGCATGTAT GCCCTAGGCT ATCGCGCCAG TGAAATAGAA
GCCATCATGC TCGGCTCAGA TTGGTCAAAA GGATTTTCAG ACACCATTCC CCGTGAACAA
CTGGCCTATC GTGACAAACA GCAGCGGGAT CAATTCAATA TTCCCATTAG CTTAGGCTAC
AGCCAAGGAC AGCTCAAAGG CCCCACAGGT TTATTGCAAG GGCAAACCAT GTCGCAGTTA
TTGCAATACT CCACCGACTT AGTGGAGCAG TTTGGTGATT TTGATCAACT GGCCATCCCC
TATCGCGCCG TGGCGACAGA TTTGGTGACC AGTGAAGCTG TGGTGTTAAG TAGTGGCAGC
ATAGTACAGG CCATGCAGGC TTCGGCGACG GTGCCTGGCG CGCTGCAACC GGCAAGCATT
AATGGCCGTT TACTTATCGA TGGCGGCATA GCCAACAACA TGCCGGTGGA TGTGGTGAAA
GCCATGGGCG CGGATATTAT TATTGCCGTG GATATCGGCT CGCCACTGGC AAGGCATGAG
CAGCTCAACA GCACGATTGC CGTGCTTGAA CAATTATCAA CTATCCTGAC CAATGCCAGC
AGTGCCAGGC AAAAAGCCTT GCTGTCTGAG GAGGATATTA TTATTCGCCC CGCCATAGAC
AATTTAAGCA CCACAGATTT TAGCATCATG GGCTTGGCAT TAACTTTGGG CGAACAAGCG
GCCAGTTTTC AGTTGGCAAA ATTGTCAAAA TTGAGCATGG GCACCGAGGA GTACCTTGCC
TATCAGCAGG CAAAACAGCG TAAAAGTCTT AGATGGTTAG ATCAATTGAG CAAGCCTTTA
GTGGCGGTGA AATTCGACAA TCAATCTAAG GTCAGTGAAA GCTTGCTGCA AGAAAAGTTC
GATTTAAAAC CCGGTGATAT CGTCACTAAA GCTTCGTTGG ATGCGGCCTT GAAACGGGTG
TATTCACTGA ATAAATTCGA GCGTGTCGAT GCCGAATTTG ATGACAGCAA AGCCGGGCGT
ATACTCACCC TTAAAACCAA AGCTAAATCT TGGGGCCCCA ATTACCTGCA GGCAGGTTTT
AATTGGGAAG ACGATTTTAC CTTGGATTCT GTGGTGGCCA TATCACTGGC TTATACCATG
ACAGATTTAA CCGACAACGA TGGTGAATGG CGCAACGAGT TGGAGCTGGG TTATAAGCAG
CTGGTTGCTA CCGAGTTTTA CCAGCCCTTG GATAGAGATC AAAAATTTTA TAGTCGAAAT
AGATACCAAT ACGAGAGCCG CAAAAATGAC ATCTATGATG ATCAAGGCCG TAATTTAAAG
TTGGAGAAAG ACGTGAGTCG CTTCGATTTT GGCATAGGCT ATAACTATTC AGATGCAGGT
ATTGTGGAAT TAGGCCTAGT GGCCGAAACC GGTGTCATAA GCAATGACGC CATAAACATG
CGAAACCTTG ATTACTCATC ATTTGGCGGT TATATCAAGG TGGCCTATGA CACCTTGAAC
AGCATTAGTT TCCCCACCGA AGGCAATCGT TTCAGTGTTA ATGCTTACTT AAGAGATGAC
GACTTCAGCG GGATAGTTTT TACTGATAAC CAAGATTTGG CATGGCAAAT TGAAGCGGAT
TGGAAGGGGG CATTAAACTT AGGCCATCAT GCCATAGTGG GTAAAGTCGC CTTGGCGACA
ACCGAGAATG ACGGTAACGA TACCTTGCAG CTTGCTGAGC TTGGCGGCTT CTTGAATTTA
TCAGGTTTTC ATAAACACGG CTTAGTGGGC GCCCATAAGG TCTTCGGTGC CTTTATTTAC
CAATATGATT TGGGACGGGA TGTATTGATC ACAGATTTAC CCCTGTACCT AGGCACCAGC
TTGGAAGGCG GCAATGTCTG GTATGAGCGG GATCTGGTTG ATTTAAATGA TTTAATCTAC
TCTGGCAGTT TGTACTTAGG CACAGACACC ACCTGGGGCC CCGCCGCATT AGGCTTTGGC
TTAAGTGACA ATGGCGAGAA AGCCTTCTAC CTGTTTATCG GCAAGAACTT CTAA
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| Protein sequence | MNWRAPLYFI CLILASNVSA KERPTIGLVL SGGGAKGAAH IGVLKVLEAN NIPVDYIAGT
SIGAYVAGMY ALGYRASEIE AIMLGSDWSK GFSDTIPREQ LAYRDKQQRD QFNIPISLGY
SQGQLKGPTG LLQGQTMSQL LQYSTDLVEQ FGDFDQLAIP YRAVATDLVT SEAVVLSSGS
IVQAMQASAT VPGALQPASI NGRLLIDGGI ANNMPVDVVK AMGADIIIAV DIGSPLARHE
QLNSTIAVLE QLSTILTNAS SARQKALLSE EDIIIRPAID NLSTTDFSIM GLALTLGEQA
ASFQLAKLSK LSMGTEEYLA YQQAKQRKSL RWLDQLSKPL VAVKFDNQSK VSESLLQEKF
DLKPGDIVTK ASLDAALKRV YSLNKFERVD AEFDDSKAGR ILTLKTKAKS WGPNYLQAGF
NWEDDFTLDS VVAISLAYTM TDLTDNDGEW RNELELGYKQ LVATEFYQPL DRDQKFYSRN
RYQYESRKND IYDDQGRNLK LEKDVSRFDF GIGYNYSDAG IVELGLVAET GVISNDAINM
RNLDYSSFGG YIKVAYDTLN SISFPTEGNR FSVNAYLRDD DFSGIVFTDN QDLAWQIEAD
WKGALNLGHH AIVGKVALAT TENDGNDTLQ LAELGGFLNL SGFHKHGLVG AHKVFGAFIY
QYDLGRDVLI TDLPLYLGTS LEGGNVWYER DLVDLNDLIY SGSLYLGTDT TWGPAALGFG
LSDNGEKAFY LFIGKNF
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