| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3362 |
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| Symbol | hslU |
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| ID | 4019910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4008044 |
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| End bp | 4009369 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957415 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_564361 |
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| Protein GI | 91794710 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAGA TGACACCTAG GGAAATCGTC CACGAGCTCG ATGCCCATAT CATAGGCCAA
AATAAGGCCA AACGAGCGGT TGCTGTGGCG CTGCGTAATC GCTGGCGCAG AATGCAGCTA
GCCCCTGATT TACGCCAAGA AGTCACCCCG AAAAATATCC TTATGATAGG CCCAACTGGT
GTGGGTAAGA CGGAAATTGC CCGTCGTCTC GCCAAGCTTG CTAACGCACC TTTTATCAAG
GTTGAAGCCA CTAAATTTAC CGAAGTGGGC TACGTGGGCA AAGAAGTCGA ACAGATCATT
CGCGATCTCA CCGACTCTGC AGTAAAGATG ACCCGCGAGC AGCAGATGAA AAAATGCCGT
TTTCGCGCCG AAGAATTGGC CGAAGAGCGC ATCTTAGATG CCCTCTTGCC TAAAGCCAAA
GAAGACTGGG ACAGCGAAAA GAAAGACGAT TCAGGCACTA GACAGATTTT TCGCAAGAAA
CTCCGTGAAG GTCAGCTAGA CGATAAAGAA ATCGACATCG ATATCGCCGC GCCGCAGATT
GGCGTTGAAA TCATGGCGCC TCCTGGCATG GAAGAAATGA CCAATCAGTT GCAAGGGTTA
TTCCAAAACC TAGGTCAGAG CACTTCTAAG CGTAAGAAAC TTAAAATTAA AGATGCCTTT
AAACAACTGA TTGAAGATGA AGCGGCAAAG CTTGTGAATC AAGAAGATCT TAAAGAGCAG
GCCATAGATC TGGTTGAACA AAACGGCATC GTCTTCTTAG ATGAAATCGA CAAAATTTGT
AAGCGCGGCG AAACTTCGGG ACCAGACGTA TCCCGTGAAG GGGTGCAACG TGATCTACTG
CCATTGGTTG AAGGCTGTAC GGTAAGCACG AAACACGGCA TGGTGAAAAC CGACCATATT
CTGTTTATCG CCTCTGGTGC ATTCCAGATG TCAAAACCCT CGGATTTGAT TCCTGAGTTA
CAAGGCCGTC TGCCCATTCG CGTGGAGTTA GACCCTTTAA CCGCCAATGA CTTTAAACGC
ATTTTAACCG AACCAAATGC CTCATTAACC GAGCAATATA TTGCACTAAT GGCCACTGAA
GGCGTAACCA TCTCCTTCCT TGAGTCGGGG ATAGACAAGC TTGCAGAAGC CGCCTGGCAA
GTGAATGAGC GCACCGAAAA CATTGGTGCC CGCCGTTTGC ATACCGTGAT GGAAAAGCTG
ATGGAAGACA TCTCTTTCGA TGCCTCAGAT AAGTCCGGCA GTGCTTTTGT TATCGATGCT
GACTATGTCA CCGAGCATTT AGATACCTTA GTGCAAGATG AAGACTTGAG CCGCTTTATT
CTGTAA
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| Protein sequence | MSEMTPREIV HELDAHIIGQ NKAKRAVAVA LRNRWRRMQL APDLRQEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVEQII RDLTDSAVKM TREQQMKKCR
FRAEELAEER ILDALLPKAK EDWDSEKKDD SGTRQIFRKK LREGQLDDKE IDIDIAAPQI
GVEIMAPPGM EEMTNQLQGL FQNLGQSTSK RKKLKIKDAF KQLIEDEAAK LVNQEDLKEQ
AIDLVEQNGI VFLDEIDKIC KRGETSGPDV SREGVQRDLL PLVEGCTVST KHGMVKTDHI
LFIASGAFQM SKPSDLIPEL QGRLPIRVEL DPLTANDFKR ILTEPNASLT EQYIALMATE
GVTISFLESG IDKLAEAAWQ VNERTENIGA RRLHTVMEKL MEDISFDASD KSGSAFVIDA
DYVTEHLDTL VQDEDLSRFI L
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