| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3330 |
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| Symbol | |
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| ID | 4019878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3970201 |
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| End bp | 3971691 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957383 |
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| Product | ribonuclease G |
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| Protein accession | YP_564329 |
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| Protein GI | 91794678 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA AAACCAAAAA TAAAAAAGGC TCAGAATTAT TAATCAATGT GACCCCGACC
GAGGCCAGAG TCGCCTTAGT TGAACATGGG GTATTGCAGG AAGTTCATAT TGAAAGGCGC
ATGAAGCGCG GTTTAGTGGG TAATATCTAT AAAGGTAAAA TCAGTCGAGT GCTGCCAGGT
ATGCAGGCGG CTTTTGTGGA TATTGGCTTA GATAAAGCGG CTTTTTTGCA TGCCTCAGAC
ATAGTGCCGC ACACTGAATG CGTGGCCGAT ACTGAAAAAC GTAACTTCGT GGTGCGTGAT
ATCGCAGAAC TGGTGCGCCA AGGCCAAGAT ATCATGGTGC AAGTGGTCAA AGATCCGCTG
GGCACCAAAG GCGCGCGTCT GACCACAGAT ATCACCTTGC CTTCCCGTTA TTTGGTTTTC
ATGCCTGATT CTAGTCATGT GGGGGTATCT CAGCGTATCG AAGTTGAAGC CGAGCGTAAT
CGTTTGAAAA ACATTACCTT GCCCTATGTG GATGCCGATG GCGGTTTTAT TATACGCACC
GCAGCCGAAG GAGTAGGCGA AGACGAGTTG GCACAAGATG CGGCATTTTT GCGCCGTGTC
TGGGCAAAAG TGAGTGAGCG CCGGAAACGC AAAGGCGTTA CCTTGTTGTA TCAAGACTTG
GCCTTACCCG TGCGAATTAT TCGTGATTTT GTCGGCACTG AGCTTGATCA TATTCAAGTT
GACTCGAGCC AGACATATGA TGAGTTAAGC TTGTTTGCGC AAGAGTTTAT GCCTGAAATT
GCCGATAAAA TTGAGCATTA TTCAGGGCCT GCGGCGATTT TCGACCTTTA TGACGTGGAA
AATGAAATTC AGCGCGCCCT TGGGCGCAAA GTTGAGCTTA AGTCTGGCGG TTACCTCATC
ATAGATCAGA CCGAAGCCAT GACCACAGTG GATATCAATA CCGGTGCCTT TGTCGGCCAT
AGAAACCTAG AAGAGACCAT ATTTAATACT AACCTCGAGG CCACCCAGGC CATAGCGCGG
CAGCTGAGGT TACGTAATTT AGGCGGCATC ATCATTATTG ATTTTATCGA TATGCAAAAT
GCCGAGCATA AAAGCCGGGT GCTGGCCAGC TTGCAGTCGG CCTTAAGTAA AGACAGAGTC
AAGACCAGCA TTAGCGGCTT TTCTGGCTTA GGCCTAGTTG AAATGACCCG CAAACGCACC
CGAGAGAGCT TAGAGCACGT GGTGTGCGGC GAATGTCCCA GTTGCCACGG CACGGGGAGC
ATGAAGACCA TAGAAACTGT GTCCTACGAG ATTTTCAGGG AATTGATCCG CTTAAACAGC
ACCTATGCCG CGGATGAGTT TCTTATTTAT TGCTCTCCCG CTGTGTACAA CAGCCTTCAT
GGTGATGACA GCCATCTTCT GGCTGAACTT GGCGTCTATA TTGGTAAGCG TTTGAGACTG
CAGAGTGAGC CCATGTACGC ACAAAATAAA TATGATGTGG TGATGATCTA G
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| Protein sequence | MNNKTKNKKG SELLINVTPT EARVALVEHG VLQEVHIERR MKRGLVGNIY KGKISRVLPG
MQAAFVDIGL DKAAFLHASD IVPHTECVAD TEKRNFVVRD IAELVRQGQD IMVQVVKDPL
GTKGARLTTD ITLPSRYLVF MPDSSHVGVS QRIEVEAERN RLKNITLPYV DADGGFIIRT
AAEGVGEDEL AQDAAFLRRV WAKVSERRKR KGVTLLYQDL ALPVRIIRDF VGTELDHIQV
DSSQTYDELS LFAQEFMPEI ADKIEHYSGP AAIFDLYDVE NEIQRALGRK VELKSGGYLI
IDQTEAMTTV DINTGAFVGH RNLEETIFNT NLEATQAIAR QLRLRNLGGI IIIDFIDMQN
AEHKSRVLAS LQSALSKDRV KTSISGFSGL GLVEMTRKRT RESLEHVVCG ECPSCHGTGS
MKTIETVSYE IFRELIRLNS TYAADEFLIY CSPAVYNSLH GDDSHLLAEL GVYIGKRLRL
QSEPMYAQNK YDVVMI
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