| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3314 |
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| Symbol | |
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| ID | 4019862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3945195 |
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| End bp | 3946562 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957367 |
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| Product | major facilitator transporter |
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| Protein accession | YP_564313 |
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| Protein GI | 91794662 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000092062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC ACGGACTATC GAGTCTAGAA AAAAAAGTCG CATTTTCCCT TGCCGGTGTA
TTTGGCCTGC GAATGATGGG CTTGTTTATG ATCATGCCAA TTTTCGCCCT CTATGGTCAG
CATTTAGAAG GCTTCTCCCC CTTGTGGGTG GGAATCGCCA TCGGCGCCTA TGGCTTAACC
CAAGCCCTGC TGCAAATACC TATGGGGATA CTGTCAGACA AGTATGGCCG TAAACCCATA
ATCTTAATTG GCTTAGTCTT GTTTGCTGTT GGCAGCATCA TCGCCGCCAT GTCGGATCAC
ATCTATTGGG TGGTCTTTGG CCGCGCAGTG CAAGGTATGG GGGCGATAGC GGCCGCGGTA
TTGGCCTTAG CGGCGGATTT AACCCGCGAT GAACAGCGCA CTAAAGTGAT GGCGATTATT
GGCATGTGTA TCGGCCTTTC ATTCGCATTA TCCCTATTGG CCGGGCCCTT AGTGGCGCAA
TATTTAGGCC TAAGTGGGAT ATTCTGGCTG ACCGCAGTGC TGGCGGTATT GGGCATGGCG
ATAGTGCACT TCTTAGTGCC CAATCCAATT TCACAGGCTC CCAAAGGGGA TACCTTAGCG
GCACCAGCCA AACTTAGGCG TATGCTACTG GACCCACAAT TATTTAGGCT CGATGCCGGT
ATCTTTATTT TGCACTTAGT GCTGACGGCA GTATTTGTGG CGCTGCCCTT TAATTTGGTG
GATGCGGGCT TAGTGAAAGA GCAACATTGG CTGCTGTACT TCCCGGCTTT TGTGGCGGCT
TTTGTGCTTA TGGTGCCTAT GATCATCATA GGGGTTAAGC GCAACAATAC TAAGACCATG
TTCCAGCTGT CTTTGGTTAT CATGATGCTT TCTTTGTTGT TGATGGGCTT ATATGCGCAA
AACTTGTGGT TATTGAGTGC CGCCGTAGTG CTATTTTTTA CCGGCTTTAA CTATTTAGAG
GCCTCACTGC CAAGTTTAAT CGCCAAATTC AGTCCAGTAG GCGAGAAGGG ATCTGCCATG
GGGGTCTATT CAACCAGTCA ATTTTTAGGC GCATTTTGTG GCGGCATGTT AGGTGGCGGC
GCTTATCAAT ATTTAGGCGC CGAAGGGGTG TTTTTTGTCG CCAGTGCCTT GATGGTTATT
TGGCTGTTTT TAAGTTTTGG CATGGAAAAA CCTGTGCTAT TAAAGAGTGT TACTCTAGAA
GCCCATATTA CCGATAAACC CCATGCCTTA AGTATGGCAG CGCAATTATC TCAGCTTGAG
GGCGTAGTCG AGGCCATGGT GGTGCTAGAA GAGAAGGTGG CTTATTTAAA AGTCGACTCT
CATTTCGATT TAAGCAAAGC CCGAGCTGTG TTAGGCTCTG CACATTAG
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| Protein sequence | MTNHGLSSLE KKVAFSLAGV FGLRMMGLFM IMPIFALYGQ HLEGFSPLWV GIAIGAYGLT
QALLQIPMGI LSDKYGRKPI ILIGLVLFAV GSIIAAMSDH IYWVVFGRAV QGMGAIAAAV
LALAADLTRD EQRTKVMAII GMCIGLSFAL SLLAGPLVAQ YLGLSGIFWL TAVLAVLGMA
IVHFLVPNPI SQAPKGDTLA APAKLRRMLL DPQLFRLDAG IFILHLVLTA VFVALPFNLV
DAGLVKEQHW LLYFPAFVAA FVLMVPMIII GVKRNNTKTM FQLSLVIMML SLLLMGLYAQ
NLWLLSAAVV LFFTGFNYLE ASLPSLIAKF SPVGEKGSAM GVYSTSQFLG AFCGGMLGGG
AYQYLGAEGV FFVASALMVI WLFLSFGMEK PVLLKSVTLE AHITDKPHAL SMAAQLSQLE
GVVEAMVVLE EKVAYLKVDS HFDLSKARAV LGSAH
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