Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3313 |
Symbol | |
ID | 4019861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3944411 |
End bp | 3945106 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637957366 |
Product | single-strand binding protein |
Protein accession | YP_564312 |
Protein GI | 91794661 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0358843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTC GCGGTGTTAA TAAAGTCATT ATTGTAGGCA ATTTAGGCCA AGATCCAGAA GTACGCTACA TGCCTAATGG CAATGCTGTT GCCAATATTA CAGTGGCGAC CAGCGAGTCA TGGAAAGATC AACAAGGCCA GCAACAAGAG CGTACCGAAT GGCACCGTGT GGTCATGTTC GGTAAGTTGG CTGAAATCAC TGGTGAATAC CTACGTAAAG GTTCGCAAGT GTATTTAGAA GGCAAATTGC AGACACGTAA GTGGAAAGAT CAAAGCGGTC AAGACAAGTA CACCACCGAA ATCGTTGTCG ATCAAAGCGG TAGCATGCAG ATGCTAGGTA GCCGTAACCA AAATCAGGGA CCAAGCCAAG CGGGCTCACA AGGTTCACAA GAGGGTGGCT ATAGCGCCCC AGCACAGAAC CAGTATGCCG CTCCAGCTCC TGCACCACAG GCTCAGCGCC CAGTTGCAAC ACCAAATCAA CAATACAATG CGCCGCAGCA GGCTGCGGGT GCTTATAAAC AGCCACAGCA AGCACCGCAG CAGCCTAGCT ATGCGCCTAA GCCTCAGCAG GCACCACAGC AAGGCGGTGG TTATCAGCAA GCCGCTCCTG CTCAGCGCCC AGCGCCGCAA GCACAGCCGC AGCAAAACTT CACTCCAGAT TTGGACGACG GTTGGGATGA CGATATCCCG TTCTAA
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Protein sequence | MASRGVNKVI IVGNLGQDPE VRYMPNGNAV ANITVATSES WKDQQGQQQE RTEWHRVVMF GKLAEITGEY LRKGSQVYLE GKLQTRKWKD QSGQDKYTTE IVVDQSGSMQ MLGSRNQNQG PSQAGSQGSQ EGGYSAPAQN QYAAPAPAPQ AQRPVATPNQ QYNAPQQAAG AYKQPQQAPQ QPSYAPKPQQ APQQGGGYQQ AAPAQRPAPQ AQPQQNFTPD LDDGWDDDIP F
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