Gene Sden_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3313 
Symbol 
ID4019861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3944411 
End bp3945106 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID637957366 
Productsingle-strand binding protein 
Protein accessionYP_564312 
Protein GI91794661 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0358843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTC GCGGTGTTAA TAAAGTCATT ATTGTAGGCA ATTTAGGCCA AGATCCAGAA 
GTACGCTACA TGCCTAATGG CAATGCTGTT GCCAATATTA CAGTGGCGAC CAGCGAGTCA
TGGAAAGATC AACAAGGCCA GCAACAAGAG CGTACCGAAT GGCACCGTGT GGTCATGTTC
GGTAAGTTGG CTGAAATCAC TGGTGAATAC CTACGTAAAG GTTCGCAAGT GTATTTAGAA
GGCAAATTGC AGACACGTAA GTGGAAAGAT CAAAGCGGTC AAGACAAGTA CACCACCGAA
ATCGTTGTCG ATCAAAGCGG TAGCATGCAG ATGCTAGGTA GCCGTAACCA AAATCAGGGA
CCAAGCCAAG CGGGCTCACA AGGTTCACAA GAGGGTGGCT ATAGCGCCCC AGCACAGAAC
CAGTATGCCG CTCCAGCTCC TGCACCACAG GCTCAGCGCC CAGTTGCAAC ACCAAATCAA
CAATACAATG CGCCGCAGCA GGCTGCGGGT GCTTATAAAC AGCCACAGCA AGCACCGCAG
CAGCCTAGCT ATGCGCCTAA GCCTCAGCAG GCACCACAGC AAGGCGGTGG TTATCAGCAA
GCCGCTCCTG CTCAGCGCCC AGCGCCGCAA GCACAGCCGC AGCAAAACTT CACTCCAGAT
TTGGACGACG GTTGGGATGA CGATATCCCG TTCTAA
 
Protein sequence
MASRGVNKVI IVGNLGQDPE VRYMPNGNAV ANITVATSES WKDQQGQQQE RTEWHRVVMF 
GKLAEITGEY LRKGSQVYLE GKLQTRKWKD QSGQDKYTTE IVVDQSGSMQ MLGSRNQNQG
PSQAGSQGSQ EGGYSAPAQN QYAAPAPAPQ AQRPVATPNQ QYNAPQQAAG AYKQPQQAPQ
QPSYAPKPQQ APQQGGGYQQ AAPAQRPAPQ AQPQQNFTPD LDDGWDDDIP F