Gene Sden_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3235 
Symbol 
ID4019764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3868870 
End bp3870126 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content46% 
IMG OID637957288 
ProductDNA-directed DNA polymerase 
Protein accessionYP_564234 
Protein GI91794583 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCCC TTGTTGATGC TAACTCATTC TACTGCAGCG CGGAGCAAGT GTTCCGCCCT 
GACTGGCGTG GTAAGCCCAT TATCGTGTTA AGTAATAATG ATGGCTGTAT TGTGGCTGCT
AATCGTCAGG CCAAGGCACT TGGTATCCCT AAATTTTCAC CTTACTTTAA AGTTAAAAAC
CTCTGCATTA AGCAAGGCGT GATCGCTTGC TCTAGTAACT ATGAGCTCTA TGCCGACTTA
TCGAGCAAGA TGATGAGTAT TATTGGCCGC TTTGCTCCTG AACAACATGT GTATTCCATA
GATGAAAGCT TCTTATCTTT TGCCCATTGC TATCCCGCTA TTAAATGCCT GCAGACACAA
GGCCAGTTAA TTCGCCGCGC GGTCTGGAAA GAGGTACGCC TTCCAGTCTG TGTTGGTATA
GCAGCGACGC TCACACTGGC TAAAATTGCT AACCACGCGG CAAAGAAGAT TGAGGGTTAT
CAAGGTGTAT GTGTAATCAA TACCGACCAT GAGCGAGTAG CTATTCTAAA ACAACTTTCG
ACAGAGGACG TGTGGGGGAT TGGTCGCAGA ATAAGCAAAA AGCTTGAGTT AATGAACATC
AAAACTGCGT TCGACCTTGC TAATATGCCG GCAGGCTTAG CCAGAAAACA ATTCAGCATA
GAGATAGAGC GTACCGTTCG TGAGTTAAAT GGCCAGGCAT GTAAGGTTTG GGATGAAGCA
AGAGCTGATA AGAAGCAGAT ATTCAGCACT CGAAGCGTTG GCGAACGGAT CACCGATTAT
AACTCACTGC TTCAAGCTTT AAGTAAGCAT GTGGGTATCG CAGCCGCCAA GGCTCGTTCT
CAAGGTTCAA GTTGTAAGAC TATGATGTTA TTTGCTAGTA ACTCGCCCTT TGATGAGCAG
TCTAGAAGCT TCAAAGCCAT AGTTCATTTT GCAAGCCCAA CCAACTGCAG CGCTGAAATA
ACTAAAGCCA TGACACAGGC CGCCACACAG CTGTTCCGTG AAGGCGTTCG TTACTACAAA
ATTGGGGTTG GGTTAATCGA CTTAGCAAGT GATAAACACA GGCAACTTGA TTTATTCAGT
TCATCCAGAG CCAACCCCTC ATTGATGTTG GTTTTAGATA ATCTGAATCA ACGCTATGGC
CGTGATACCT TATTTCTTGT GGCTCAAGGC ATAGAACAAA AGTGGAGCAT GCGCCGTGAA
CTACTCACCC CCCAATACAC CACAGACTGG GTAAGCTTAC CTCGGATAAA GTGCTAG
 
Protein sequence
MFALVDANSF YCSAEQVFRP DWRGKPIIVL SNNDGCIVAA NRQAKALGIP KFSPYFKVKN 
LCIKQGVIAC SSNYELYADL SSKMMSIIGR FAPEQHVYSI DESFLSFAHC YPAIKCLQTQ
GQLIRRAVWK EVRLPVCVGI AATLTLAKIA NHAAKKIEGY QGVCVINTDH ERVAILKQLS
TEDVWGIGRR ISKKLELMNI KTAFDLANMP AGLARKQFSI EIERTVRELN GQACKVWDEA
RADKKQIFST RSVGERITDY NSLLQALSKH VGIAAAKARS QGSSCKTMML FASNSPFDEQ
SRSFKAIVHF ASPTNCSAEI TKAMTQAATQ LFREGVRYYK IGVGLIDLAS DKHRQLDLFS
SSRANPSLML VLDNLNQRYG RDTLFLVAQG IEQKWSMRRE LLTPQYTTDW VSLPRIKC