Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3235 |
Symbol | |
ID | 4019764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3868870 |
End bp | 3870126 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637957288 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_564234 |
Protein GI | 91794583 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCCC TTGTTGATGC TAACTCATTC TACTGCAGCG CGGAGCAAGT GTTCCGCCCT GACTGGCGTG GTAAGCCCAT TATCGTGTTA AGTAATAATG ATGGCTGTAT TGTGGCTGCT AATCGTCAGG CCAAGGCACT TGGTATCCCT AAATTTTCAC CTTACTTTAA AGTTAAAAAC CTCTGCATTA AGCAAGGCGT GATCGCTTGC TCTAGTAACT ATGAGCTCTA TGCCGACTTA TCGAGCAAGA TGATGAGTAT TATTGGCCGC TTTGCTCCTG AACAACATGT GTATTCCATA GATGAAAGCT TCTTATCTTT TGCCCATTGC TATCCCGCTA TTAAATGCCT GCAGACACAA GGCCAGTTAA TTCGCCGCGC GGTCTGGAAA GAGGTACGCC TTCCAGTCTG TGTTGGTATA GCAGCGACGC TCACACTGGC TAAAATTGCT AACCACGCGG CAAAGAAGAT TGAGGGTTAT CAAGGTGTAT GTGTAATCAA TACCGACCAT GAGCGAGTAG CTATTCTAAA ACAACTTTCG ACAGAGGACG TGTGGGGGAT TGGTCGCAGA ATAAGCAAAA AGCTTGAGTT AATGAACATC AAAACTGCGT TCGACCTTGC TAATATGCCG GCAGGCTTAG CCAGAAAACA ATTCAGCATA GAGATAGAGC GTACCGTTCG TGAGTTAAAT GGCCAGGCAT GTAAGGTTTG GGATGAAGCA AGAGCTGATA AGAAGCAGAT ATTCAGCACT CGAAGCGTTG GCGAACGGAT CACCGATTAT AACTCACTGC TTCAAGCTTT AAGTAAGCAT GTGGGTATCG CAGCCGCCAA GGCTCGTTCT CAAGGTTCAA GTTGTAAGAC TATGATGTTA TTTGCTAGTA ACTCGCCCTT TGATGAGCAG TCTAGAAGCT TCAAAGCCAT AGTTCATTTT GCAAGCCCAA CCAACTGCAG CGCTGAAATA ACTAAAGCCA TGACACAGGC CGCCACACAG CTGTTCCGTG AAGGCGTTCG TTACTACAAA ATTGGGGTTG GGTTAATCGA CTTAGCAAGT GATAAACACA GGCAACTTGA TTTATTCAGT TCATCCAGAG CCAACCCCTC ATTGATGTTG GTTTTAGATA ATCTGAATCA ACGCTATGGC CGTGATACCT TATTTCTTGT GGCTCAAGGC ATAGAACAAA AGTGGAGCAT GCGCCGTGAA CTACTCACCC CCCAATACAC CACAGACTGG GTAAGCTTAC CTCGGATAAA GTGCTAG
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Protein sequence | MFALVDANSF YCSAEQVFRP DWRGKPIIVL SNNDGCIVAA NRQAKALGIP KFSPYFKVKN LCIKQGVIAC SSNYELYADL SSKMMSIIGR FAPEQHVYSI DESFLSFAHC YPAIKCLQTQ GQLIRRAVWK EVRLPVCVGI AATLTLAKIA NHAAKKIEGY QGVCVINTDH ERVAILKQLS TEDVWGIGRR ISKKLELMNI KTAFDLANMP AGLARKQFSI EIERTVRELN GQACKVWDEA RADKKQIFST RSVGERITDY NSLLQALSKH VGIAAAKARS QGSSCKTMML FASNSPFDEQ SRSFKAIVHF ASPTNCSAEI TKAMTQAATQ LFREGVRYYK IGVGLIDLAS DKHRQLDLFS SSRANPSLML VLDNLNQRYG RDTLFLVAQG IEQKWSMRRE LLTPQYTTDW VSLPRIKC
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