Gene Sden_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3226 
Symbol 
ID4019755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3861878 
End bp3862621 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content48% 
IMG OID637957279 
Producthypothetical protein 
Protein accessionYP_564225 
Protein GI91794574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000725415 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCATT TAAGAAAAAC TTTACTTGCC GCCGCCTGTT TAATGGCGGT TTCTAGCGCG 
GCTCACAGTG ATACCTTTGC CGGTTTTAAA GTGGGTGGTG ACTATTGGCA CAGCGATGCC 
AGTGGTTATT TCGCCGATGA TAGCGGTGCT AAGGTCAACA GCGATTTAGA CGCCGATGCC 
CAAGGTAGCC TTTGGTTTGC TGTTGAGCAC ATGCTGCCAT TTGTGCCTAA TCTAAAAATT 
CGTGAAAACC GTGTTTCTGC CACCTCGAGC CTAGACAATG CTGACTTTAA CTTTAATGGT 
CATGGGTTTT CTGGCAAGGT CGGCATAGAT AACAAGCTAA ACAATACAGA TTTTGTGCTG 
TATTACGAGC TACTGGACAG TGATTTGGCC GAGCTTGATG TGGGCGGCGC CTACAAGATG 
ATGAATGGTT CGCTGCGGGT AAGTGATGCC GGTTACCCTG AGCAAATTGA TATCGACAGT 
GGCATTGCCA TGGGTTACGC CAGCGGACAA GTGGGTGTGC CTGGTATGGG GTTATACGCT 
TTTGCCGAGT TGCTACACGG CGTCAGTGAA TCAAATGTGC ACGATTACTC AGTGGGCCTA 
GGTTGGGTAT TTGATGGGCT AGTTGTCGAT ACTAAAGTGC GTGTCGGTTA CCGTGATATG 
AGTTTTGATG TCAGCCGCTT TTCTGGCATG ACACAAGATA CTCAGCTTAG CGGCGTGTTT 
GCTGGTGTTG AATTAGACTT TTAA
 
Protein sequence
MLHLRKTLLA AACLMAVSSA AHSDTFAGFK VGGDYWHSDA SGYFADDSGA KVNSDLDADA 
QGSLWFAVEH MLPFVPNLKI RENRVSATSS LDNADFNFNG HGFSGKVGID NKLNNTDFVL 
YYELLDSDLA ELDVGGAYKM MNGSLRVSDA GYPEQIDIDS GIAMGYASGQ VGVPGMGLYA 
FAELLHGVSE SNVHDYSVGL GWVFDGLVVD TKVRVGYRDM SFDVSRFSGM TQDTQLSGVF 
AGVELDF