| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3178 |
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| Symbol | |
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| ID | 4019704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3810007 |
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| End bp | 3811959 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957228 |
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| Product | ABC transporter related |
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| Protein accession | YP_564177 |
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| Protein GI | 91794526 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCAATTT CGTCCTTTAT TTCTCCAACT AAGTTGTCAT TCATGATTAG CATTAGCCAA
GCACAATTAG TTCGCGGTAC CAAGACCTTG CTCGATGAAG CCTCATTAAC CATCTATCCT
GGCCACAAGG TCGGCCTAGT GGGCGCCAAT GGCACAGGTA AGTCATCACT AATGGCGCTG
ATCTTAGGAC AACTTCATTT AGACAAGGGT GAATTCAGCT TACCAGCGGG TTGGCGCATC
GCTACTGTGG CCCAGGAAAC CCCAGCCCTT GAGGTATCGG CTCTTGAATA TGTTATCGAT
GGTGACACTG AGTACCGTCA GTTAGAAGCT CAGTTGCATC AAGCCCAAGC CGATGATGAT
GGTAACGCCA TCGCACGCAT TCATGGACAA ATTGATGCTA TTGGCGGCTA TGCCATTAAA
GCCCGCGCTG GCTCACTATT AGCCGGCCTA GGTTTTAGTG AAGTATCACA AAGCAATGAA
GTAAAAAGCT TTTCTGGTGG TTGGCGCATG CGCTTAAACT TAGCCCAAGC GCTGTTATGC
CGCTCAGAAT TGTTATTACT CGATGAGCCC ACTAACCACT TAGACTTAGA TACCATGTAC
TGGCTTGAAG GCTGGATTAA ATCCTATCAA GGCACCCTTA TTCTTATCAG TCATGATAGG
GACTTTATCG ACGGTATTGT CGATGAAATC GTCCACGTAG AACATTACAA ACTAAATTTC
TACAAGGGTA ATTACAGCGC CTTTGAACGC ATTCGCGCCG AACGTTTGGC TCAGCAACAA
GTGGCTTTTG AGCGCCAGCA AAAAGAGCGT GCGCATATGC AAACTTTCGT CGACCGTTTC
CGCTACAAGG CCAGTAAGGC TAAGCAAGCT CAGAGCCGTT TAAAGGCATT GGAGCGCATG
ACGGAATTAC TGCCATCCCA CGCTCAGAGC CCATTTTATA TGGAGTTTCG TGAGCCAGAA
GCCTTGCCAA ACCCACTTAT TGCCATGGAG CAAGTGTCCG TTGGCTATGG CGATACCACC
ATTTTAAGCA AGGTACATTT GAACTTAGTG CCAGGCGCTC GCATCGGTCT TTTAGGCCGC
AATGGCGCAG GCAAGTCGAC CCTCATCAAA CTGTTATCTG GGCAATTACA AGCCAAAACG
GGTCTGTATC AGCCTAATCC CGGCGTCAAT ATTGGTTACT TTGCCCAGCA TCAGATAGAG
TTTTTACGCT TAGATGATAC CCCGCTGCAA CATCTTGTGC GCTTAGCGCC CAATGCTCGA
GAGCAAGAGC TGCGTAACTT CCTTGGCGGC TTTGGCTTCG ATGGCGATAT GGTACTTTCC
CCAGTGCGGC CCTTCTCTGG CGGCGAAAAA GCCCGTCTAG TCTTAGCGCT GCTGGTATGG
CAAAGGCCTA ACCTGTTGCT GCTCGATGAA CCCACCAACC ACTTAGATTT AGAGATGCGT
CACGCCTTAA CCATGGCACT GCAAACGTTT GAAGGCGCGA TGGTGATAGT GTCGCACGAT
AGGCATTTAT TACGCTTGAG CTGTAGTGAT TATTACTTGG TTGACCAAGG CGTGGTCACA
AGCTTCGATG GCGACCTAGA TGATTACCAT CAATGGTTGT TGGAAGCGGC TAAAGCGGCT
CAATCAACCC CAGCCAATGG TGATGATGCC AAGCCATTGC AAGATAAAAA ACAGCAAAAG
CGCATCCAAG CCGAACTAAG GCAAAAAGTG TCGCCACTCA AGAAGTTGCA AGCCAAGCTT
GAAACGGCCC AGGACAAATA TGCAACACGG CTCAAAGAAT TAGAAGCCGC ATTAGCCGAT
ACTAGCCTCT ATGACGCTGA GAACAAGGCG CAAATGACGG CGGTATTGAA TGAGCGTACC
CAGCTGACTC AAGCCATGGA AGAAAGTGAA ATGAATTGGT TAGAGCTACA AGAGCAGATC
GACGAGATAG AACTTGAGTT CGAACTCGAA TAG
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| Protein sequence | MPISSFISPT KLSFMISISQ AQLVRGTKTL LDEASLTIYP GHKVGLVGAN GTGKSSLMAL
ILGQLHLDKG EFSLPAGWRI ATVAQETPAL EVSALEYVID GDTEYRQLEA QLHQAQADDD
GNAIARIHGQ IDAIGGYAIK ARAGSLLAGL GFSEVSQSNE VKSFSGGWRM RLNLAQALLC
RSELLLLDEP TNHLDLDTMY WLEGWIKSYQ GTLILISHDR DFIDGIVDEI VHVEHYKLNF
YKGNYSAFER IRAERLAQQQ VAFERQQKER AHMQTFVDRF RYKASKAKQA QSRLKALERM
TELLPSHAQS PFYMEFREPE ALPNPLIAME QVSVGYGDTT ILSKVHLNLV PGARIGLLGR
NGAGKSTLIK LLSGQLQAKT GLYQPNPGVN IGYFAQHQIE FLRLDDTPLQ HLVRLAPNAR
EQELRNFLGG FGFDGDMVLS PVRPFSGGEK ARLVLALLVW QRPNLLLLDE PTNHLDLEMR
HALTMALQTF EGAMVIVSHD RHLLRLSCSD YYLVDQGVVT SFDGDLDDYH QWLLEAAKAA
QSTPANGDDA KPLQDKKQQK RIQAELRQKV SPLKKLQAKL ETAQDKYATR LKELEAALAD
TSLYDAENKA QMTAVLNERT QLTQAMEESE MNWLELQEQI DEIELEFELE
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